Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g01320 ATGGAAATGCCTGGGAGACGATCGAACTACTCTCTTCTGAGCCAGTATCCTGAAGAACAACAATCGCAGCAGCAATCCAAATTTTCTGGTGGAGTAGCAGTTGCATCTCAATCTCCAGCTTCGTTTTACGAGTCTCTTTCTGCGGAGAAGAATAAAGGGAAGACTTTTGATTGGGATGGAGATCATCGATTGCAACAAGGCGGACGGATGGGGAATTTGTTTCCGTCGATCGGATTGCAGAGGCAGTCGAGCGGGAGCAGCTTTGGGGAGAGCTCGCTGTCGGGGGATTACTACGTTCCAACGCTATCGATGGCGGCGAATGATCCGGAAGTATTTGGTCATTTGCAGGATGATGGGTTTAGGGGCGGAGGGGGAGAGTTGAGGTTGAAGGCGGTGGAAGCACCGGGGTCTTCGTCGTCAAAGAGCTGGGCTCAGCAGACTGAGGAGAGCTACCAATTGCAGCTGGCGTTGGCGCTTCGGCTTTCGTCTGAGGCTACTTGCGCTGATGATCCCAATTTCTTGGATCCGGTCCCCGATGAATCGGCAATCAGGTCTTCATCTGCTTCCGCCGAGGCTATGTCTCATCGATTCTGGGTGAATGGATGCCTATCGTACTTTGATAAGGTTCCGCATGGATTTTATCTGATCCATGGGATGGATCCATATGTATGGACAGTATGCACTGATCTGCAAGAGAATGGTCGGGTCCCGTCGATTGAATTACTTAAGGCCGTTGATCCTAGTGATGATTCATCAATTGAAGTGGTTTTGATTGATAAACACAGTGATCCCAGTTTAAAGGAGCTACAAAATAGAGTGGTTAGCCTTTCTTGTAGCTGCATTTCCACAAAAGAGGTGGTTGACCAGCTTGCAAAGCTCGTTTGCAATCATATGGGGGGTGCAGCTTATACTGGAGAAGATGGTTTAGTTTCCAGTTGGAAGGACTGCAGTGATGTTCTAAAGGATTGCTTAGGTTCTGTCGTGCTTCCAATGGGAAGCCTCTCCGTTGGTCTTTGCCGCCACCGTGCTCTGCTGTTCAAAGTTTTAGCGGACACAATTGATTTACCATGCCGAATTGCCAAGGGCTGTAAATATTGTAGAAGAGATGATGCTTCCTCCTGTCTTGTGAGGTTTGGTCTTGACAGGGAATATTTAGTTGATTTGATTGGGAATCCGGGATGCTTATGCGAGCCTGATTCCTTACTCAATGGCCCATCTTCCATCTCAATTTCTTCACCTTTGCGTCTTCCAAAATTCAAACCAGTTGAAACAACTGAAAGTTTCAGGTTATTGGCCAAACAGTATTTCCTGGACTGTCAATCACTTAATATCATATTTGATGATGCTTTTACAGTTACTACTGTTGATCGAGAAGAATCATCAGCAATGCCTGTTTCAGGCAACAATGACGAAGTATCTGTGTCACCTCTGCCCCAAAGAGTTGCTCAACCAAATATCCGTGGTAGAGATTCCCAGCTGCAAAGTTCATGTAAACCTCCTCAGAATGTTATAAGCTCAATAAATTTGGTCAATGATCCCACCGCACCAAAACTCATCCCACCAAATGGGCATAGAGATGCTCAACCCATTTTAGCCTTGTCTAACCCAAGGCTCGATATGGGTAGAGAAATTTCTCTTGATGTGGAGGATTTGGACATTCCGTGGAGTGATCTTGTTTTAAAGGAGAAAATCGGAGCAGGTTCATTTGGGACTGTCCACCGTGCTGATTGGAATGGTTCGGATGTTGCGGTGAAGATTCTCATGGAGCAAGAGTTTCATGCAGAGCGCTTCAAGGAATTTTTGAGGGAGGTTGCAATAATGAAACGACTACGGCATCCAAACATCGTTCTTTTTATGGGTGCTGTTACTCGGCCCCCAAACTTGTCCATTGTCACGGAATACTTATCAAGAGGCAGCTTGTATAGGCTTTTGCATAAATCAGGTGCGAGAGAAACTTTGGATGAGAGGCGTCGATTAAATATGGCTTATGACGTGGCAAAGGGTATGAATTATCTTCATCGGCGGAATCCTCCCATTGTTCATCGAGATTTGAAGTCTCCAAATCTTTTGGTGGACAAAAAATATACAGTGAAGGTCTGCGATTTTGGCCTTTCCCGCTTAAAGGCAAACACATTTCTCTCCTCTAAATCTGCGGCAGGGACTCCTGAGTGGATGGCACCGGAAGTTCTCCGTGACGAGCCATCAAATGAGAAATCTGATATCTACAGCTTTGGTGTGATATTGTGGGAGCTCGTGATGTTGCAACCACCTTGGATTACTTTAAATCCAGCACAGGTGGTAGCTGCTGTTGGTTTTAAGAACAGAAGGCTTGAGATTCCAAACAATGTAACTCCTCAAGTGGCCACATTAATTGAGGCTTGCTGGGCAAATGAGCCCTGGAAGCGTCCGTCCTTTTCCAGTATCATGGAATCCTTGAAGCCATTGATCAAACCCCCGGCACCTCAACCAGTTCGTGCAGACATGGCACGGCTAACCTGA 2499 0.4634 MEMPGRRSNYSLLSQYPEEQQSQQQSKFSGGVAVASQSPASFYESLSAEKNKGKTFDWDGDHRLQQGGRMGNLFPSIGLQRQSSGSSFGESSLSGDYYVPTLSMAANDPEVFGHLQDDGFRGGGGELRLKAVEAPGSSSSKSWAQQTEESYQLQLALALRLSSEATCADDPNFLDPVPDESAIRSSSASAEAMSHRFWVNGCLSYFDKVPHGFYLIHGMDPYVWTVCTDLQENGRVPSIELLKAVDPSDDSSIEVVLIDKHSDPSLKELQNRVVSLSCSCISTKEVVDQLAKLVCNHMGGAAYTGEDGLVSSWKDCSDVLKDCLGSVVLPMGSLSVGLCRHRALLFKVLADTIDLPCRIAKGCKYCRRDDASSCLVRFGLDREYLVDLIGNPGCLCEPDSLLNGPSSISISSPLRLPKFKPVETTESFRLLAKQYFLDCQSLNIIFDDAFTVTTVDREESSAMPVSGNNDEVSVSPLPQRVAQPNIRGRDSQLQSSCKPPQNVISSINLVNDPTAPKLIPPNGHRDAQPILALSNPRLDMGREISLDVEDLDIPWSDLVLKEKIGAGSFGTVHRADWNGSDVAVKILMEQEFHAERFKEFLREVAIMKRLRHPNIVLFMGAVTRPPNLSIVTEYLSRGSLYRLLHKSGARETLDERRRLNMAYDVAKGMNYLHRRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKANTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDIYSFGVILWELVMLQPPWITLNPAQVVAAVGFKNRRLEIPNNVTPQVATLIEACWANEPWKRPSFSSIMESLKPLIKPPAPQPVRADMARLT* 833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g01320 832 CDD STKc_MAP3K-like 564 812 - -
Eupl01g01320 832 MobiDBLite consensus disorder prediction 8 32 - -
Eupl01g01320 832 ProSiteProfiles Protein kinase domain profile. 558 816 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl01g01320 832 Pfam Protein tyrosine and serine/threonine kinase 559 812 IPR001245 GO:0004672|GO:0006468
Eupl01g01320 832 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 162 821 - -
Eupl01g01320 832 ProSitePatterns Serine/Threonine protein kinases active-site signature. 679 691 IPR008271 GO:0004672|GO:0006468
Eupl01g01320 832 Pfam Ethylene-responsive protein kinase Le-CTR1 190 396 - -
Eupl01g01320 832 PRINTS Tyrosine kinase catalytic domain signature 632 645 IPR001245 GO:0004672|GO:0006468
Eupl01g01320 832 PRINTS Tyrosine kinase catalytic domain signature 720 730 IPR001245 GO:0004672|GO:0006468
Eupl01g01320 832 PRINTS Tyrosine kinase catalytic domain signature 673 691 IPR001245 GO:0004672|GO:0006468
Eupl01g01320 832 PRINTS Tyrosine kinase catalytic domain signature 783 805 IPR001245 GO:0004672|GO:0006468
Eupl01g01320 832 PRINTS Tyrosine kinase catalytic domain signature 739 761 IPR001245 GO:0004672|GO:0006468
Eupl01g01320 832 ProSitePatterns Protein kinases ATP-binding region signature. 564 585 IPR017441 GO:0005524
Eupl01g01320 832 SMART serkin_6 558 816 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl01g01320 832 Gene3D Phosphorylase Kinase; domain 1 551 636 - -
Eupl01g01320 832 FunFam Serine/threonine-protein kinase isoform 1 548 636 - -
Eupl01g01320 832 MobiDBLite consensus disorder prediction 1 32 - -
Eupl01g01320 832 FunFam Serine/threonine-protein kinase CTR1 637 822 - -
Eupl01g01320 832 Gene3D Transferase(Phosphotransferase) domain 1 637 823 - -
Eupl01g01320 832 SUPERFAMILY Protein kinase-like (PK-like) 541 812 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g01320 Eupl-Chr1 33334336 33351633 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g01320 1 828 MAP Kinase Kinase Kinase AT5G03730 67.520 0.0 1016
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Eupl01g01320 PK_Tyr_Ser-Thr 5.6e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g01320 K14510 - nnu:104587676 1234.94