Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Eupl01g01298 | ATGATTGATTCTGGCATTAACTTGGTGATGACAGTTATTGGATTCGCAGTAAGTACGATGTTCATCGTATTCGTCTGCACGAGGCTTGTTTGTGCCAGGATCCAATTGAACGCTTCCAGACGATCCTTCCCAACAGCTTCTAGATCCGACCTTGGCTTTCTGGAACGTGGGCTTCATGGCCTGGAGCCTGTTGTTGTAGCTACCTTTCCTACAAAGAAATATAGCGATGAGTTTTTCTCATCTAGAGAAGATTCCCAGTGTATGGTGTGCCTCTCGGAATACCAAGAGAAAGACATACTGCGTATCCTGCCCTACTGTGGGCATTTCTTCCATGTCACCTGCATAGATATATGGCTGCAGCAGCATTCCACATGTCCTGTTTGTCGGATTTCATTGCGAAATTCCCTCCACTCACATTCATTTCGCTGTTTGTATAGTGGTCATGGATATTCCTCAAGAGGCATTGACAACCGAAGGATGGAATCCATTCAGGAGGATCAGTTTGCATCAGAGCCTGATGCAGCAGAAGCCGGAGAGAGCATCTCCTCCTTGACAGAGGGTAATCATGTCCCAAAAGAAACTGGCCTCCATGAACCGGGAAACAAGCATATTGAGAGTCCATCCAATCCATAG | 633 | 0.4645 | MIDSGINLVMTVIGFAVSTMFIVFVCTRLVCARIQLNASRRSFPTASRSDLGFLERGLHGLEPVVVATFPTKKYSDEFFSSREDSQCMVCLSEYQEKDILRILPYCGHFFHVTCIDIWLQQHSTCPVCRISLRNSLHSHSFRCLYSGHGYSSRGIDNRRMESIQEDQFASEPDAAEAGESISSLTEGNHVPKETGLHEPGNKHIESPSNP* | 211 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Eupl01g01298 | 210 | CDD | RING-H2_EL5-like | 86 | 129 | - | - | |
Eupl01g01298 | 210 | SMART | ring_2 | 87 | 128 | IPR001841 | - | |
Eupl01g01298 | 210 | MobiDBLite | consensus disorder prediction | 165 | 210 | - | - | |
Eupl01g01298 | 210 | FunFam | E3 ubiquitin-protein ligase ATL6 | 52 | 135 | - | - | |
Eupl01g01298 | 210 | Pfam | Ring finger domain | 86 | 129 | IPR001841 | - | |
Eupl01g01298 | 210 | ProSiteProfiles | Zinc finger RING-type profile. | 87 | 129 | IPR001841 | - | |
Eupl01g01298 | 210 | PANTHER | OS11G0150450 PROTEIN | 1 | 143 | - | - | |
Eupl01g01298 | 210 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 56 | 135 | IPR013083 | - | |
Eupl01g01298 | 210 | SUPERFAMILY | RING/U-box | 81 | 135 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Eupl01g01298 | Eupl-Chr1 | 33080141 | 33086490 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Eupl01g01298 | 47 | 194 | C3H Transcription Factor Family | AT4G10150 | 36.709 | 6.33e-20 | 82.8 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Eupl01g01298 | - | - | nnu:104586939 | 328.561 |