Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g01295 ATGGGCCTTCAAGACGATTCTTCAGCTTCTTCTTACTCAAGCGACCTCTATTCCTCGCACGTGCCGTCCAACCAGGTACAGGTGTACATGCCACGCATCATGCATAAGCGAAAGGCCGGCCGGAAGAAGTTCCGAGAGACACGACACCCCATCTATAGAGGTGTCAGGCAGAGGAATGGTGGGAAATGGGTGTGCGAGATGCGTGAGCCACACAAGAAGTCACGCATATGGCTGGGTACCTTCCCTACCCCCGAAATGGCTGCTAGGGCTTATGATGTCGCAGCCTCGGCTCTTAGAGGGAAATCTGCACCACTCAATTTCCCTGACTCGGCCTGGCTCCTTCCATCTCCCAACTCATCTTCACATAGGGACATACAATCCGCAGCACTTGAGGCTGCTGAAGCATTTCGACCTACAACATGCTTGTCATCGTCGTTGTCGTCATCATCATCATCCTCTTCCTCCTCCATTAAGTTGCCACGTATCAAGATCCCAGGTAAGCTTCCGGAGCCTTCTACAACATTCTTGGATGAGGAGGCATTGTTTAATATGCCAGGTTTAATTAGCAGCATGGCTGAAGGGTTGCTCCTTACACCGCCAACTATGCAAAAAGGGTTCGATTGGGAAGACGTAAATTGCAACATGGACTTGACTTTGTGGAGTGATTAA 669 0.5037 MGLQDDSSASSYSSDLYSSHVPSNQVQVYMPRIMHKRKAGRKKFRETRHPIYRGVRQRNGGKWVCEMREPHKKSRIWLGTFPTPEMAARAYDVAASALRGKSAPLNFPDSAWLLPSPNSSSHRDIQSAALEAAEAFRPTTCLSSSLSSSSSSSSSSIKLPRIKIPGKLPEPSTTFLDEEALFNMPGLISSMAEGLLLTPPTMQKGFDWEDVNCNMDLTLWSD* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g01295 222 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 9 221 IPR045277 GO:0003700
Eupl01g01295 222 Gene3D AP2/ERF domain 51 109 IPR036955 GO:0003700|GO:0006355
Eupl01g01295 222 SMART rav1_2 51 114 IPR001471 GO:0003700|GO:0006355
Eupl01g01295 222 Pfam AP2 domain 50 100 IPR001471 GO:0003700|GO:0006355
Eupl01g01295 222 ProSiteProfiles AP2/ERF domain profile. 51 108 IPR001471 GO:0003700|GO:0006355
Eupl01g01295 222 CDD AP2 50 110 IPR001471 GO:0003700|GO:0006355
Eupl01g01295 222 PRINTS Ethylene responsive element binding protein signature 52 63 IPR001471 GO:0003700|GO:0006355
Eupl01g01295 222 PRINTS Ethylene responsive element binding protein signature 74 90 IPR001471 GO:0003700|GO:0006355
Eupl01g01295 222 FunFam Ethylene-responsive transcription factor 2 50 109 - -
Eupl01g01295 222 SUPERFAMILY DNA-binding domain 51 110 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g01295 Eupl-Chr1 33046200 33048703 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g01295 36 221 AP2-EREBP Transcription Factor Family AT5G51990 53.226 4.77e-63 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Eupl01g01295 AP2 2.7e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g01295 - - nnu:104586936 275.404