Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g01294 ATGATTGATGCTGGATTACTGAATGAAGTCTATGACATTTACAACCTGAATGCAGATTATACTCGAGGCTTGCGGCAGGCAATTGGTGTTAGGGAATTCGAGAATTTTCTGAGATTTTACCTCTCCAATGCAGAGACATCTTATCCTCGCATCGAAGACAAAGATTTTGACTCTAATGCTGCGGCCAGTATCCCAGTGACAACGAAGAGGGATGATGAGATGTTGAAAGAGAACATGAAATTGATTCTGGATTCTGAAGATAGCCATCACAAAGTTTTGTTAGATGAAGCTATTGACCAGCTAAAAGCAAACACCAGAAGGCTTGTTCGTCGTCAGAAAAGGAGGCTTAATCGATTGCAGACGTTTTTTGGGTGGGACCTGCATTATATCGATGCAACTGAAGCCTTTTTAGGCAACTCCAATGATTCATGGCCCAGACAAGTGGTTGAACCGTCTGTTAACATCATCAAATCTTTCTTGTATGAGGATGTGAGCTTGGTGCCTGGCTCAGAGACGTTCAATGGCATGGAGAGGCAGAGCTTGGCTTCGAGGGACTTGTGGACTCAATATGTGTGTGAGGCTTGTGGAAATCGGATCCTTCGAGGGGCACATGAGTGGGAACAACACAAACAAGGGCGTGGGCATCGAAAGCGAATCCTTCATCTAAGGAAGAAGTGTCAAAATTCGTACTTTATAGAGCAGCAGCAGCAGCAGCAGCAGCAGCAGAACCCTGAATTAGGTGAAGGTATGGAAAGAGAGGGATTCGAACCCTCGATAAACCAAAGCCTACATAGCAGTTCCAGTGCCTACTCCATGAACCACTCAGCCATCTCTCCTACATAA 843 0.4508 MIDAGLLNEVYDIYNLNADYTRGLRQAIGVREFENFLRFYLSNAETSYPRIEDKDFDSNAAASIPVTTKRDDEMLKENMKLILDSEDSHHKVLLDEAIDQLKANTRRLVRRQKRRLNRLQTFFGWDLHYIDATEAFLGNSNDSWPRQVVEPSVNIIKSFLYEDVSLVPGSETFNGMERQSLASRDLWTQYVCEACGNRILRGAHEWEQHKQGRGHRKRILHLRKKCQNSYFIEQQQQQQQQQNPELGEGMEREGFEPSINQSLHSSSSAYSMNHSAISPT* 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g01294 280 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 72 160 IPR039657 -
Eupl01g01294 280 FunFam tRNA dimethylallyltransferase 185 228 - -
Eupl01g01294 280 Pfam IPP transferase 1 114 - -
Eupl01g01294 280 Gene3D Classic Zinc Finger 185 231 - -
Eupl01g01294 280 Gene3D - 128 160 IPR027417 -
Eupl01g01294 280 MobiDBLite consensus disorder prediction 233 280 - -
Eupl01g01294 280 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 1 127 - -
Eupl01g01294 280 MobiDBLite consensus disorder prediction 258 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g01294 Eupl-Chr1 33027469 33028704 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g01294 1 218 C2H2 Transcription Factor Family AT2G27760 53.846 9.96e-66 210
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g01294 K00791 - psom:113322560 316.235