Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g01293 ATGGAAACTGTGGAATCCGAGGGAGTCGTGAATCCGGAAAATCCCAAGCAAAACCCTAACAAGAAGAAACCTAAAGTGGTGATAGTGATGGGGGCTACTGGTTCTGGAAAATCTCGGCTTGCCATCGACCTCGCCTCCCACTTTCCCCTCGAGGTCATCAACGCTGACTCCATGCAGGTCTACGAAGGTTTGGATGTCCTCACCAATAAGGTTCTCCTCCAAGACCAGAAAGGAGTGCCGCATCATCTTTTGGGAACCCTCAGCCCTAATGTCCAATTCACATCCAAACATTTCCGTGATTCCGCAATTCCCATCATAGACGACGTATTATCCCGCAATCGCTTGCCTGTCATTGTTGGCGGTACAAATTATTATATTCAGGCTCTTGTGAGTCCATTCCTTCTAGATGATTCGATAGAAGACGTTGATGACTGCTTTTTGAATGGTTCCCTTGGGGACAATGAGCGGGATTATAAATTTGATTCAGGATGTGATGATTATAGTATTAGCTATGACTGTCTTAAAGGGCTTGATCCAGATGCAGCAAACAGGATTCATCCAAATGACTATAGAAAGGTAAATCATTACCTTAGTTTGTATGCACGCTCAGGTGTTCTCCCGAGCAAGCTTTTCCAAGGAAAAGCGTCAGAGGGCAGGGGTGGGGTCGAGTGGATAATTTCAGATACGATTGTTGTTTCATATGTGTGGATGCTTCTCTCCCAGTGCTGGACCGATACGTCGAGCAAAGAGTAG 753 0.4595 METVESEGVVNPENPKQNPNKKKPKVVIVMGATGSGKSRLAIDLASHFPLEVINADSMQVYEGLDVLTNKVLLQDQKGVPHHLLGTLSPNVQFTSKHFRDSAIPIIDDVLSRNRLPVIVGGTNYYIQALVSPFLLDDSIEDVDDCFLNGSLGDNERDYKFDSGCDDYSISYDCLKGLDPDAANRIHPNDYRKVNHYLSLYARSGVLPSKLFQGKASEGRGGVEWIISDTIVVSYVWMLLSQCWTDTSSKE* 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g01293 250 NCBIfam tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 26 216 IPR018022 GO:0008033
Eupl01g01293 250 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 23 140 IPR039657 -
Eupl01g01293 250 Pfam IPP transferase 59 214 - -
Eupl01g01293 250 Gene3D - 23 132 IPR027417 -
Eupl01g01293 250 Gene3D - 166 214 - -
Eupl01g01293 250 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 20 135 IPR027417 -
Eupl01g01293 250 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g01293 Eupl-Chr1 33022609 33027463 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g01293 29 222 C2H2 Transcription Factor Family AT2G27760 60.000 2.14e-81 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g01293 K00791 - rvl:131330567 317.005