Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g01286 ATGGATTACCAACTGAAGCAATGGAGAAACCAGCATCAGTCAGAGCAACCACCTTCTGCAAAGATCCCAAGACTCCTTGAACCACCCCATCAAACACCTTCTGGCTCTGGCTCTGGCTCTGGCTCTGGCTCTGCTCTTCCATTGTTTGTACCTGAACCGAACAGCAGGATCAGCAGCTTGTCAGCATTTCCAGATTCTACGACTACTTCCAGATTTCCCAGGATGGGAGGCCTCTTCAGCTTGGGTCAGTGGCAGGAGCTTGAACTTCAGGCTTTGATCTTCAAGTATATGTTGGCAGGGATAGCTGTTCCTTCTGAGCTCCTTCAGCCCATAAAAAAAAACCTTGTCAATACTCCTGCATATTATCTCCACTCCCCTCACCAGCAGTATCAGCATTACCAACCAGCTATGTTGCAGTCAGGATACTGGGGTCGAAGTTTTATGGACTCGGAGCCTGGTAGATGCCGGAGAACTGATGGGAAGAAGTGGAGGTGCTCTAGGGATGTGGTGCAAGGCCAGAAGTACTGCGAGCGCCACATGCACCGAGGCCGAAACCGTTCAAGAAAGCCCGTGGAAATCCCCACGCCCGTGACAGTGGGTGGTGGCCTGAAAACTGCTACCCCCATTGCTGCCTTGCCCTTAACAGCTGTAGCTAATGGGACGCATTTTGCCCTTTCTGGGTCGTCGCCTTCAATGGATCTCTTTCACCTCAACCAAAGATCCTCAGAGAGTAAACCTGGAAATGGGGGCCTTCTAGATATCCACAGCAACAAAGTTTCTGGGGAAGGCAGACCTGATGGCCAGGTACTCCGGCCTTTCTTTGATGATTGGCCGAGATCACATCAAGAATCCAATGGTGTTGGCAGCACAGGCAGTCCAGCAACTTCTACAACCTGCCTCTCCATATCTATTTCGGGGAACCCATCTTCGGACTTTTCGTTGAAACTGTCGACAGGCAATGGGGATGAACCAGATTCTCGAGAAGGGAACATAGGAGGGGAGCGACCTCAGTTGAATTGGAGGACTGGATGGGCCCCCGACCAGGTGAGTTCTATGGGGGGCCCGCTTGCTGAGGCCCTGCGATCGTCAACTAATTCTTCGCCGACTAGTGTCCTGCATGAACGGCCACGAGGGTCTGCTTCCGAGACCAGTAGTACTGTTACCAACTCAGTTTAG 1176 0.5196 MDYQLKQWRNQHQSEQPPSAKIPRLLEPPHQTPSGSGSGSGSGSALPLFVPEPNSRISSLSAFPDSTTTSRFPRMGGLFSLGQWQELELQALIFKYMLAGIAVPSELLQPIKKNLVNTPAYYLHSPHQQYQHYQPAMLQSGYWGRSFMDSEPGRCRRTDGKKWRCSRDVVQGQKYCERHMHRGRNRSRKPVEIPTPVTVGGGLKTATPIAALPLTAVANGTHFALSGSSPSMDLFHLNQRSSESKPGNGGLLDIHSNKVSGEGRPDGQVLRPFFDDWPRSHQESNGVGSTGSPATSTTCLSISISGNPSSDFSLKLSTGNGDEPDSREGNIGGERPQLNWRTGWAPDQVSSMGGPLAEALRSSTNSSPTSVLHERPRGSASETSSTVTNSV* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g01286 391 MobiDBLite consensus disorder prediction 282 324 - -
Eupl01g01286 391 MobiDBLite consensus disorder prediction 239 391 - -
Eupl01g01286 391 PANTHER GROWTH-REGULATING FACTOR 5 48 311 IPR031137 GO:0005634|GO:0006351|GO:0032502
Eupl01g01286 391 SMART QLQ_2 77 113 IPR014978 GO:0005524|GO:0005634|GO:0006355
Eupl01g01286 391 MobiDBLite consensus disorder prediction 1 48 - -
Eupl01g01286 391 Pfam QLQ 79 111 IPR014978 GO:0005524|GO:0005634|GO:0006355
Eupl01g01286 391 MobiDBLite consensus disorder prediction 1 18 - -
Eupl01g01286 391 ProSiteProfiles WRC domain profile. 149 193 IPR014977 -
Eupl01g01286 391 ProSiteProfiles QLQ domain profile. 78 113 IPR014978 GO:0005524|GO:0005634|GO:0006355
Eupl01g01286 391 MobiDBLite consensus disorder prediction 357 391 - -
Eupl01g01286 391 Pfam WRC 151 192 IPR014977 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g01286 Eupl-Chr1 32958706 32965074 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g01286 1 374 GRF Transcription Factor Family AT3G52910 49.742 2.48e-82 255
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Eupl01g01286 WRC 8.2e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g01286 - - nnu:104587868 575.089