Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g01278 ATGGGTCCATTCCCTGGTACTTGTGATATTGTGGAATCAAAGGAAGATTTGGATCCTGTTCTACATTCTAAAGGAACCAACGTCCCCAGTTCTGAATCGAGAGTGGACGACAGAAATGGAAAGCGTCCCATGCTGAAAATGGGACAGAATTATTCAGTAGAGGATGATCTTAATCAGCTTTTCGAGGCAATTGATCTCAGAGTTTCGGCTAGGGGTGCGGCTTTGTCACATCAATTAGGTAAGGGTGTGTCACGGAAGAATGCCCTGAAAAAGCCAATTAAAGTAGGTGTATCTCAAGCATCAGGTATTGGAATTTCAGAATCTGTGACGTTGAAGCAGGCACTAAGGGGGCTATGCATTTCACATGCATCAGAGATGGCTGCTATGAAGCGGTTACCGAAGCCAGCAAGATTTTCTGGGGCCTCAGAAGCTGGAGCTATCAAGAGGTTGTACAGAGCAGTGGTAGTTGAGTCCAGTGAATCAGGTCTTCCACTAGATGAAGGTAAAGGGAGTTTGGTAGAAATCTCCCTTGTGCCTGAAAACAGTACAACGAGTTCCTCTCAGATTTATGGATCCGTGCAAGTGCCCAAGACAAAGTCATCGAATCTGAGCCTTCATTCTTCTACCCGATTTGCAAGTGCAACCAAAACATCGCTAGAAGATGAGATTGTTCCTGTTTCATCAGAGTTTGGGAGCGAAACATCAATGCTGAAGCTGGATCAGAAAGGGAAGCTGAAATCTGCACTGGCTTTGTCTAGCTCTAGTACCAGCAATAAAGTATTAGAGATAGATGAGATTGTTCCTGCATCATTAGAAGTTGGGAGCCAAACATCTACACTAGAGGTTATGCAGAAAAGCGAGCTGCATTCTGCACCTTCTTTATCTTGCTCTAGTACTGAAAGTAAAGTAAGCAAAACCACTGGCAATAGTTCACGTCTAATGAAGCCAGTTTTCAGGAACAAGAGCTTTCTGAAGAAGAAAGCAAAGCAGGATTCAGCTTCTGCATCCAGCAGTTCAAATACATGTAATGAAGGCAATGATGTTGACTTGGGCCCTAGCACAAGTAAGTTGGTTTGTGGGATTCACAACTTTAACCTGAAGAATGTAAGGAAAGAATGTGCTTCTCCAGCATCCAGCAGTACTAGTCTCAGTGTTGAAGTAAGTTCGAGTAATGGGGACTCTGGTGCAAGTAAATCTGGTGTCTGTTCAAATAGCTGTAACGACATAACTGTTGGAGCGAAAACAAGTGAGAGCTCAAGGCCAAGAGAAAAGGGGGACCTCTCCCAAAGCTCAAAAAGTAGCATTGGTGAGTACAGCAGTAGCACTAGCATCAGTGAGGAAAGCAATCTAAGTGGGTCTAGTTGTAGTGGCAATAGGCCCCACATGTCGAAAGATTTGAGATGGAATGCCATTCGCCATGTTGAGATGCGGCATGGAAGCTTAGGGTTTACTTACTTCAAGCTGTTCAAACGGCTTGGTTGTGGAGATATTGGGACTGTATATCTTGCCGAGCTAAGTGGAACAAACTGCCTATTTGCTTTGAAGGTTATGGACAATGAGTTTTTAGCTAGCCGGAAGAAGATGCCAAGGGCCCAAACTGAAAGAGAAATACTGCAAATGCTAGATCATCCTTTTCTCCCTACATTATTTGCGCATTTTTCTACGGAAAAGTTTTCGTGCTTAGTTATGGAGTATTGTCCAGGGGGAGATCTGCACATCCTCCGACAGAGGCAGCTTAGCAGGAGTTTCTCTGAACAGGCAGCCAGGTTTTATGTTGCAGAAGTCCTACTTGCGTTGGAATACCTACACATGCTTGGGGTTGTATACCGAGACCTGAAACCAGAAAATATTCTGGTTCGAGAAGATGGTCACATCATGCTCTCTGATTTCGACTTGTCACTCAGATGCACTGTAAGTCCAACACTTCTTAAGTCGTCTTCATCTGTGGTGGAACCCACAAAAAAGTTATCAGACCCATGCATGGAATCTAGCTGTATCGATCCCTTTTGCCTCCAACCATCCTGGGCCCAAGTGCCGTGCTTCACACCTAGGTTTATATCCCCCGTGGCAAAAACGCGGAAGCTAAAATCAGATCCAGGAGCTCAAGTGAACCCATTGCCCCAGCTTGTGGCGGAGCCAACAAGTGCACGATCTAACTCTTTTGTCGGGACCCACGAATACTTGGCCCCTGAGATAATCAAAGGAGAGGGCCATGGCAGTGCTGTTGATTGGTGGACGTTTGGAATCTTTCTATACGAGCTTCTATTTGGTAAAACACCCTTCAAGGGATCAGGAAACGAGGACACCTTAACCAATGTGGTGTCACAGAGCCTCAGATTCCCAGAAAGTCCACCAGTCAGTTTTCAGGCGAGGGACCTGATCAGAGGGCTGTTAGCAAAGGAGCCGGAGAACCGGTTGGGATCTGTTAAAGGGGCACCTGAGATCAAGCAACACCCCTTCTTTGAGGGGCTGAACTGGGCATTGATACGATGCACTGTCCCACCAGAGCTGCCAAAATCTTGTGATCCTGGACTTGCGATGGTGGCCTGCCAGGAGAGCAAGTGTGAGTTTCAGACCAACGAAGAGCAACCAGTATTTGAGCTGTTCTAG 2610 0.4594 MGPFPGTCDIVESKEDLDPVLHSKGTNVPSSESRVDDRNGKRPMLKMGQNYSVEDDLNQLFEAIDLRVSARGAALSHQLGKGVSRKNALKKPIKVGVSQASGIGISESVTLKQALRGLCISHASEMAAMKRLPKPARFSGASEAGAIKRLYRAVVVESSESGLPLDEGKGSLVEISLVPENSTTSSSQIYGSVQVPKTKSSNLSLHSSTRFASATKTSLEDEIVPVSSEFGSETSMLKLDQKGKLKSALALSSSSTSNKVLEIDEIVPASLEVGSQTSTLEVMQKSELHSAPSLSCSSTESKVSKTTGNSSRLMKPVFRNKSFLKKKAKQDSASASSSSNTCNEGNDVDLGPSTSKLVCGIHNFNLKNVRKECASPASSSTSLSVEVSSSNGDSGASKSGVCSNSCNDITVGAKTSESSRPREKGDLSQSSKSSIGEYSSSTSISEESNLSGSSCSGNRPHMSKDLRWNAIRHVEMRHGSLGFTYFKLFKRLGCGDIGTVYLAELSGTNCLFALKVMDNEFLASRKKMPRAQTEREILQMLDHPFLPTLFAHFSTEKFSCLVMEYCPGGDLHILRQRQLSRSFSEQAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLSLRCTVSPTLLKSSSSVVEPTKKLSDPCMESSCIDPFCLQPSWAQVPCFTPRFISPVAKTRKLKSDPGAQVNPLPQLVAEPTSARSNSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNEDTLTNVVSQSLRFPESPPVSFQARDLIRGLLAKEPENRLGSVKGAPEIKQHPFFEGLNWALIRCTVPPELPKSCDPGLAMVACQESKCEFQTNEEQPVFELF* 870
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g01278 869 MobiDBLite consensus disorder prediction 428 459 - -
Eupl01g01278 869 Pfam Protein kinase domain 718 821 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl01g01278 869 Pfam Protein kinase domain 487 640 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl01g01278 869 Gene3D Transferase(Phosphotransferase) domain 1 715 836 - -
Eupl01g01278 869 SUPERFAMILY Protein kinase-like (PK-like) 464 839 IPR011009 -
Eupl01g01278 869 FunFam Serine/threonine-protein kinase D6PK-like 484 569 - -
Eupl01g01278 869 MobiDBLite consensus disorder prediction 1 43 - -
Eupl01g01278 869 MobiDBLite consensus disorder prediction 289 311 - -
Eupl01g01278 869 SMART serkin_6 486 821 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl01g01278 869 MobiDBLite consensus disorder prediction 329 347 - -
Eupl01g01278 869 CDD STKc_phototropin_like 486 844 - -
Eupl01g01278 869 MobiDBLite consensus disorder prediction 325 347 - -
Eupl01g01278 869 MobiDBLite consensus disorder prediction 377 401 - -
Eupl01g01278 869 PANTHER FLIPPASE KINASE 1-RELATED 281 842 - -
Eupl01g01278 869 Gene3D Phosphorylase Kinase; domain 1 486 565 - -
Eupl01g01278 869 MobiDBLite consensus disorder prediction 413 459 - -
Eupl01g01278 869 ProSiteProfiles Protein kinase domain profile. 486 821 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl01g01278 869 ProSitePatterns Serine/Threonine protein kinases active-site signature. 607 619 IPR008271 GO:0004672|GO:0006468
Eupl01g01278 869 FunFam serine/threonine-protein kinase D6PK-like 570 637 - -
Eupl01g01278 869 Gene3D Transferase(Phosphotransferase) domain 1 566 635 - -
Eupl01g01278 869 FunFam serine/threonine-protein kinase D6PK-like 716 839 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g01278 Eupl-Chr1 32854312 32857756 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g01278 1 844 AGC Kinase Gene Family AT2G36350 47.974 0.0 733
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Eupl01g01278 Pkinase 1e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g01278 - - nnu:104586921 1099.73