Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g01277 ATGCAACCATGTCTCGACGACCTCGCCGACGACCTCCAAAGCATGAGCTTCAACTCCTCCTCCACCACAACCACCACCACCACCACCACAACCACAACCACAACCGATATCAACCGCAGCACCAGCTCCGGCTCCGAGACAACCTGGACTGCCTCGAATCTATGCTCGATCTCCAGCAAGCCCCACGCTTCCTCCGGTGATGCTTGCTGGGACGGGATCCGACGAGTCAAAACAGAATATGGTGGACTTGGACTCGGCGACTTGCGATTCGTTCAGAGATTGGGGAGCGGTGATATCGGAAGCGTGTATTTAACGGAGATAAAAGGCGCTGCGGGGTGTACGTTTGCGGCGAAGGTGATGGACAAGAAGGAACTCGCGAGTCGGGACAAAGGAGGGAGGGCGAAGATAGAGAGAGAAATATTGGAGATTTTGGATCATCCATTTTTGCCCACGCTTTATGCGAGCTTGGAGTCAACGAGATGGTCGTGTTTGTTGACTGAGTTCTGTCCAGGCGGTGATCTGCACGTGCTCCGCCAGCGACAGCCGGGGAGACGTTTCGACGAGGCGGCGGTCAGGTTCTACGCATCAGAGGTGGTGGTGGCTTTAGAGTACGTCCACATGATGGGGATTGTCTACAGGGATCTTAAGCCTGAAAACGTACTCGTAAGGGCCGATGGACACATCATGTTGACTGATTTTGATCTCTCACTGAAATGCGACAATTCGAAATCAACGGCTCAGCTTGTTTCTGATCAAATTCTCTCATCAGCTGTTCCATCGTGTGATTACCCTGTTGATCCACCTCCATTTTCCTCCACCTCATGCATTCTTCCTAATTGTATCGTCCCCTCCGTCTCGTGCTTTCAACCTAAACGCAAGCGCAAGAAGAAACCAGGTCATCATGGTGGGCCCGAATTTGTAGCGGAACCAGTTGATGCGAGATCAATGTCATTCGTTGGGACCCACGAGTACTTGTCACCGGAGATCATATCAGGTGAGGGCCATGGTAGTGCGGTAGATTGGTGGACGCTTGGGATTCTCATATTTGAACTCTTGTATGGGGTGACACCCTTCAAGGGTATGGACAATGAGCTAACGCTAGCTAATATTGTCGCGCGCGCACTTGAATTCCCAAAGGAACCTTCAATAACGGCACCTACAAAGGATCTCATTACACAATTGTTGGTTAAGGATCCTGCAAAACGAATGGGGTCCACCATGGGTGCCACTGCTATCAAACACCATCCATTCTTCCAGGGTGTCAATTGGGCATTGTTGAGGTGCATGACACCTCCATACATTCCCCCAACTTTCACCGGTCGGGACGTCTCCGACGATAGCTGCCCCGACACTCCAGTAGAGTATTACTAG 1371 0.5157 MQPCLDDLADDLQSMSFNSSSTTTTTTTTTTTTTTDINRSTSSGSETTWTASNLCSISSKPHASSGDACWDGIRRVKTEYGGLGLGDLRFVQRLGSGDIGSVYLTEIKGAAGCTFAAKVMDKKELASRDKGGRAKIEREILEILDHPFLPTLYASLESTRWSCLLTEFCPGGDLHVLRQRQPGRRFDEAAVRFYASEVVVALEYVHMMGIVYRDLKPENVLVRADGHIMLTDFDLSLKCDNSKSTAQLVSDQILSSAVPSCDYPVDPPPFSSTSCILPNCIVPSVSCFQPKRKRKKKPGHHGGPEFVAEPVDARSMSFVGTHEYLSPEIISGEGHGSAVDWWTLGILIFELLYGVTPFKGMDNELTLANIVARALEFPKEPSITAPTKDLITQLLVKDPAKRMGSTMGATAIKHHPFFQGVNWALLRCMTPPYIPPTFTGRDVSDDSCPDTPVEYY* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g01277 456 FunFam serine/threonine-protein kinase D6PK-like 313 436 - -
Eupl01g01277 456 SUPERFAMILY Protein kinase-like (PK-like) 71 441 IPR011009 -
Eupl01g01277 456 CDD STKc_phototropin_like 87 436 - -
Eupl01g01277 456 ProSitePatterns Serine/Threonine protein kinases active-site signature. 210 222 IPR008271 GO:0004672|GO:0006468
Eupl01g01277 456 ProSiteProfiles AGC-kinase C-terminal domain profile. 419 456 IPR000961 GO:0004674|GO:0005524|GO:0006468
Eupl01g01277 456 Pfam Protein kinase domain 90 249 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl01g01277 456 Pfam Protein kinase domain 315 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl01g01277 456 FunFam serine/threonine-protein kinase D6PKL2 87 172 - -
Eupl01g01277 456 FunFam serine/threonine-protein kinase D6PK-like 173 240 - -
Eupl01g01277 456 Gene3D Phosphorylase Kinase; domain 1 87 172 - -
Eupl01g01277 456 MobiDBLite consensus disorder prediction 19 48 - -
Eupl01g01277 456 ProSiteProfiles Protein kinase domain profile. 88 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl01g01277 456 Gene3D Transferase(Phosphotransferase) domain 1 312 436 - -
Eupl01g01277 456 Gene3D Transferase(Phosphotransferase) domain 1 173 249 - -
Eupl01g01277 456 SMART serkin_6 88 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl01g01277 456 PANTHER FLIPPASE KINASE 1-RELATED 18 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g01277 Eupl-Chr1 32833527 32837113 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g01277 1 456 AGC Kinase Gene Family AT3G44610 62.128 0.0 535
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Eupl01g01277 Pkinase 5e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g01277 K08286 - ming:122076202 743.421