LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Eupl01g01276	ATGGCGGCGGAGCATTTCAAGTACGTGATCCTTGGTGGTGGCGTTGCTGCTGAAAATGCTGCTAATGAGTTTGTTAAACATGGCTTTAAGCCAGGCGAATTGGCAATTATTTCAAAGGAGGCGGTGCCTCCTTATGACCGTTCAGCTCTTAGTAAGGAATACCTGTGCTCTGAAGAGTGTTTTATTGAGGAACTTATGCAAATAGGCTCGTACCTCATGAAAGATCTTGCTTCCAAGACTCTTAGAAGTTCAGATGGAAGGGTCTTCAAGTATGACATTTTGATCATTGCAACTGGTTCCACCCCAGTTACAAGGTTGACCAACATTGGTATTGAAGGAGTCGATGCCAACAACATCTTCCACTTGAGAGAAATTGATGCTGCTGATAAGCTCAAAGAAGCAATGAAGGCAAAAATGAACGGAAAAGTCACGATTCTTGGAGGAGGATATATTGATCTTGAGCTTAGTGCGATGATGAAAAGCTACAACTTTGACGTTACTATGGTCTACCCTGAACCATGGTGCATGTCCCAGCTTTTTCCCCCAAAAATAGCCGCTTTCTATGAGGATTATTTTGCTATGAAAGGAATCAAAATTGTTAAGGGAACGGATGCAGTTGCGTTTTATTTCGATGCAAATGGAGAGTTAAAGGCGGTAAAACTGAAAGATGGGAGAGTGCTGGATTCTGACATTGTTGTTGTTGGTGTTGGTGTTGGTGGAAGACCTCTCACGACACTATTTAAAGGACAGGTTGACGAGGAGAAAAGTGGAATTAAGACTGACGGGTTCTTCGAAACAAGCTTTCCTAATGTGTATGCTGTGGGTGATGTGGCTACCTTCCCTTCGAAGTTGTACGGGGAGATGAGGCGAGTGCGGCTTGTCGATCATGCACGGAAATCTGCAGAACAAGCTGTGAAGGCTATCAAGGCCAGCGAAGGAGGGGAGCCGATTATTGAGTACGACTACCTTCCGTACTTCTACTCTCGCTGCTTCGATCTGTCGTGGCAATTCTACGGAGACAACGTGGGGGACACTGTGCTGTTTGGAGACAACAATCCAACATCGCCAAAGCCCAAATTCGGCACATATTGGATCAAAGATGGAAAGGTTGTGGGGGCATTCCTGGAGAGTGGGACTCCAGAAGAACATAAGGCCATTGCCGAAGTCGCAAGGCGCCAACCTCCAGTTAAGAATGTGGATCAACTGACTAAGGAAGGTCTCTCCTTTGCATGTAAGTTTTGA	1242	0.4549	MAAEHFKYVILGGGVAAENAANEFVKHGFKPGELAIISKEAVPPYDRSALSKEYLCSEECFIEELMQIGSYLMKDLASKTLRSSDGRVFKYDILIIATGSTPVTRLTNIGIEGVDANNIFHLREIDAADKLKEAMKAKMNGKVTILGGGYIDLELSAMMKSYNFDVTMVYPEPWCMSQLFPPKIAAFYEDYFAMKGIKIVKGTDAVAFYFDANGELKAVKLKDGRVLDSDIVVVGVGVGGRPLTTLFKGQVDEEKSGIKTDGFFETSFPNVYAVGDVATFPSKLYGEMRRVRLVDHARKSAEQAVKAIKASEGGEPIIEYDYLPYFYSRCFDLSWQFYGDNVGDTVLFGDNNPTSPKPKFGTYWIKDGKVVGAFLESGTPEEHKAIAEVARRQPPVKNVDQLTKEGLSFACKF*	414

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Eupl01g01276	413	Gene3D	-	9	304	IPR036188	-
	Eupl01g01276	413	PRINTS	FAD-dependent pyridine nucleotide reductase signature	91	109	-	-
	Eupl01g01276	413	PRINTS	FAD-dependent pyridine nucleotide reductase signature	8	27	-	-
	Eupl01g01276	413	PRINTS	FAD-dependent pyridine nucleotide reductase signature	256	278	-	-
	Eupl01g01276	413	PRINTS	FAD-dependent pyridine nucleotide reductase signature	142	160	-	-
	Eupl01g01276	413	PRINTS	FAD-dependent pyridine nucleotide reductase signature	231	247	-	-
	Eupl01g01276	413	PANTHER	APOPTOSIS-INDUCING FACTOR 1	4	411	-	-
	Eupl01g01276	413	PRINTS	Pyridine nucleotide disulphide reductase class-II signature	233	254	-	-
	Eupl01g01276	413	PRINTS	Pyridine nucleotide disulphide reductase class-II signature	7	29	-	-
	Eupl01g01276	413	PRINTS	Pyridine nucleotide disulphide reductase class-II signature	138	162	-	-
	Eupl01g01276	413	PRINTS	Pyridine nucleotide disulphide reductase class-II signature	266	284	-	-
	Eupl01g01276	413	FunFam	Monodehydroascorbate reductase 3	325	413	-	-
	Eupl01g01276	413	Pfam	Pyridine nucleotide-disulphide oxidoreductase	7	301	IPR023753	GO:0016491
	Eupl01g01276	413	SUPERFAMILY	FAD/NAD-linked reductases, dimerisation (C-terminal) domain	318	409	IPR016156	GO:0016491\|GO:0050660
	Eupl01g01276	413	Gene3D	-	325	413	IPR016156	GO:0016491\|GO:0050660
	Eupl01g01276	413	Gene3D	-	106	237	IPR036188	-
	Eupl01g01276	413	SUPERFAMILY	FAD/NAD(P)-binding domain	2	308	IPR036188	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Eupl01g01276	Eupl-Chr1	32811588	32827417	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Eupl01g01276	91	283	Chloroplast and Mitochondria Gene Families	AT4G21490	25.778	1.41e-06	48.5

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Eupl01g01276	K08232		-	nnu:104586919	577.785