Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g01260 ATGGATGGTGTTGCGTTGCGCCGCGTCGCGATCCAAGCCATAAATCTCACTATAAAGCGTCACCCAGGGTTTGGTGGTGCGATACCAGCCAATATAAGGCTGATCACAAGCTTAGCCCTTCTTAAACATCGACAGCACTACATAGTTTACATGGGGGATCACTCTCATTCAGATTCGGATTCCGTGATCTCAGCTAACCATGAGATGCTTTCTTCAGTTACCGGCAGTATCGATGGAGCGCAACAGGCGGCAATTCACCATTACAGCAAGAGCTTCAGAGGCTTCTCAGCTATGCTTATGCCAGAACAAGCACAAAAACTTGCCGAAAGCGAATCAGTTATTTCAGTGTTCGAGAGCAAGACGAACCCTGTCCACACCACTCATTCCTGGGAATTTCTAGGAATCAGCTCTATCCACCAATATAATGAATTAACAGTTGACGCTAAATCCGACGTGATCGTTGGCGTCATTGACACGGGAGTTTGGCCTGAGTCAGAGAGCTTCAGTGATTATGGATTAGGGCCTGTCCCCAAGAGATTTAAGGGAGAATGTGTTGTTGGAGATCATTTTACATTGGCCAACTGCAACAGGAAGCTTATCGGTGCTCGGTTCTACTCGAAAGGATTTGAAGCAGAGAATGGACCTCTTGAGTCTTTCAACAGTACTTTCTTTCTGTCGGCTCGCGACACTGATGGGCATGGCAGCCACACTGCCTCGACGGTGGCTGGATCAGTGGTGAATAATGTCAGTCTACTCGGTATAGCCACAGGGACTGCGAGGGGCGGTGTGCCTAGTGCTAGACTTGCTATCTACAAAGCATGTTGGTTCAACCTATGTAGTGATGCTGACCTCCTTTCGGCTTTCGACGATGCTACTAATGACGGTGTTGACATCATCTCTCTTTCCGTCGGCGCCACACCTCCCCAACCCAGCTTCTTTGAAGACACAATCTCGATCGGATCTTTCCATGCATTCAAGAAAGGAATTCTTCTTTCTGCTTCAGCTGGAAACTCTGGGCTCCCTAGTACTGCAGTTAATGTTGCTCCTTGGATCCTCACTGTTGCAGCTAGCTCTATCGACCGAGAATTCAATTCAAATGTCCATCTTGGAAATTCGAAAATGTTGAAGGTAAATTTGAAACCATGCCATGCACATGGGACATCCTATGATGGATCCCTGACTTCCTATCCTTCAATATTTCAGGGGTCCTCACTAAACCCACTCAAGATGGACAAACATTATGGAGTTATAGCTGCAGCTGCTGCAGCCGCCCCCGGCGTTCCGGCTACGAATGCAAGCTTCTGCAAGAACAATACTCTTGATCCTACCTTGATTAAGGGGAAGATTGTGGTATGCACCATCGAGAGGATCCTAGATAACAGAACAGAAAAAAGCACCTTTGTAAGACAAGGGGGCGGTGTCGGGATGATTCTTATCGACCCGTTGGCGAAAGACGTTGGCTTCCAATTCGTCGTCCCGGGAACTCTAATTGGTCAAAAAGAAGCAGAAGAACTTCAAGCATATCTAACCACAGATAAGAATCCGATTGCGATAATCTACCCAACAACAACAGTTATCAACACCAAACCTGCACCGGAGATGGCCGTGTTTTCTTCGATGGGACCGAATGTTATCACTCCCGAAATTATCAAACCTGATATTACAGCACCCGGGGTGAATATATTGGCCGCGTGGTCTCCATTAGCGACTAAAGCTGCCGCCGGACGATCTGTTGACTTCAACATTATTTCTGGCACCTCCATGTCTTGCCCACACGTTTCTGCAGTAGCTGCAGCCATAAAATCTTGCCACCCTTCTTGGAGCCCATCAGCCATAAAATCGGCAATAATGACAACAGCGTCGGTGCTAGATAACACTCGACGTGTTATATCGAGGGACCCAAATGGTTTTCCGACGACGCCTTTTGACTATGGATCCGGACATTTAAACCCGGTTGCTGCACTAAATCCTGGACTAGTTTACGATTTTGATTCGAACGACATCATTGATTTTCTTTGTAGTAATGGTGCAGGCCCTGCACAAATCCGAAACCTCACCAGGGAGCCAGTTAAATGCAAGAACCCACCAATCCCCTCATACAATCTCAATTATCCTTCAATTGGTGTTGCCAACATGAATGGAAGTGTATCGGTTCGAAGAATGGTGACTTACCATGGTAAAGGTCCGACAGTTTATATGGCCTTCGTGTTGAGTCCGGATGGCGTGAAAGTCGCAGTGACACCTACAAAACTCAAGTTTAGAGAGGCCGGGGAGAAGAAGACTTTCAGAGTTGATTTTATGCCTTACAAGAGCAGTAATGGAAGTTTTGTGTTTGGGGCTATAACATGGGGCAATGGTATCCACAGGGTCAGGAGTCCGATTGGACTCAATGTGGTTTCAGTTTAG 2406 0.4701 MDGVALRRVAIQAINLTIKRHPGFGGAIPANIRLITSLALLKHRQHYIVYMGDHSHSDSDSVISANHEMLSSVTGSIDGAQQAAIHHYSKSFRGFSAMLMPEQAQKLAESESVISVFESKTNPVHTTHSWEFLGISSIHQYNELTVDAKSDVIVGVIDTGVWPESESFSDYGLGPVPKRFKGECVVGDHFTLANCNRKLIGARFYSKGFEAENGPLESFNSTFFLSARDTDGHGSHTASTVAGSVVNNVSLLGIATGTARGGVPSARLAIYKACWFNLCSDADLLSAFDDATNDGVDIISLSVGATPPQPSFFEDTISIGSFHAFKKGILLSASAGNSGLPSTAVNVAPWILTVAASSIDREFNSNVHLGNSKMLKVNLKPCHAHGTSYDGSLTSYPSIFQGSSLNPLKMDKHYGVIAAAAAAAPGVPATNASFCKNNTLDPTLIKGKIVVCTIERILDNRTEKSTFVRQGGGVGMILIDPLAKDVGFQFVVPGTLIGQKEAEELQAYLTTDKNPIAIIYPTTTVINTKPAPEMAVFSSMGPNVITPEIIKPDITAPGVNILAAWSPLATKAAAGRSVDFNIISGTSMSCPHVSAVAAAIKSCHPSWSPSAIKSAIMTTASVLDNTRRVISRDPNGFPTTPFDYGSGHLNPVAALNPGLVYDFDSNDIIDFLCSNGAGPAQIRNLTREPVKCKNPPIPSYNLNYPSIGVANMNGSVSVRRMVTYHGKGPTVYMAFVLSPDGVKVAVTPTKLKFREAGEKKTFRVDFMPYKSSNGSFVFGAITWGNGIHRVRSPIGLNVVSV* 802
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g01260 801 Gene3D - 360 526 - -
Eupl01g01260 801 Pfam Subtilase family 150 629 IPR000209 GO:0006508|GO:0008236
Eupl01g01260 801 Pfam Fibronectin type-III domain 701 794 IPR041469 -
Eupl01g01260 801 FunFam Subtilisin-like protease SBT1.5 151 468 - -
Eupl01g01260 801 ProSitePatterns Serine proteases, subtilase family, serine active site. 585 595 IPR023828 -
Eupl01g01260 801 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 38 125 IPR037045 -
Eupl01g01260 801 Gene3D Peptidase S8/S53 domain 151 667 IPR036852 GO:0004252|GO:0006508
Eupl01g01260 801 Pfam PA domain 432 505 IPR003137 -
Eupl01g01260 801 CDD PA_subtilisin_like 402 519 - -
Eupl01g01260 801 Gene3D - 672 799 - -
Eupl01g01260 801 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 47 794 IPR045051 -
Eupl01g01260 801 CDD Peptidases_S8_3 124 621 IPR034197 -
Eupl01g01260 801 ProSiteProfiles Serine proteases, subtilase domain profile. 129 655 - -
Eupl01g01260 801 Pfam Peptidase inhibitor I9 46 121 IPR010259 -
Eupl01g01260 801 SUPERFAMILY Subtilisin-like 124 659 IPR036852 GO:0004252|GO:0006508
Eupl01g01260 801 FunFam Subtilisin-like protease SBT5.3 36 125 - -
Eupl01g01260 801 PRINTS Subtilisin serine protease family (S8) signature 149 168 IPR015500 -
Eupl01g01260 801 PRINTS Subtilisin serine protease family (S8) signature 584 600 IPR015500 -
Eupl01g01260 801 PRINTS Subtilisin serine protease family (S8) signature 229 242 IPR015500 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g01260 Eupl-Chr1 32596252 32605637 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g01260 42 794 Subtilisin-like Serine Gene Family AT2G04160 43.943 0.0 575
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g01260 - - jre:118348478 1096.26