Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g01255 ATGGCGGAGGAACACAGATGCAAAGCTCCTGAAGGCCACCGCCTCTGTGCCAACAACTGCGGATTCTTTGGCAGTCCGGCTACTCAAAATCTCTGCTCCAAATGCTACAGAGATCACTGCCTCAAGGAAGAACAAGCCTCTTCCGCCAAATTTGCCGTCGAGAAATCTCTCTTCGCATCGTCATCCTCAACAGCTGCAATCGCTCTTTCATCTCCCACCGTCGCTCTACCAGGAACCGCCGACGATCGCAGCGGTCCGGTAACCCTAATGGCTGGCGCATCACCTTCAGAGCCACCGCTTCCAGGTGCGGCGTCACAGCCGAACCGGTGCTCGACGTGCCGGAAACGTGTTGGACTTACTGGATTTCGTTGCCGGTGCGGAACAACGTTCTGTTCGTTGCACCGGTACCCGGAGCAACATGGATGCTCGTTCGATTTCAAGGCAGTCGGGAGGGAGGCCATAGCGAAGGCCAATCCCATCGTTAAAGCCGACAAGCTCGACAAGATCTGA 510 0.5608 MAEEHRCKAPEGHRLCANNCGFFGSPATQNLCSKCYRDHCLKEEQASSAKFAVEKSLFASSSSTAAIALSSPTVALPGTADDRSGPVTLMAGASPSEPPLPGAASQPNRCSTCRKRVGLTGFRCRCGTTFCSLHRYPEQHGCSFDFKAVGREAIAKANPIVKADKLDKI* 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g01255 169 ProSiteProfiles Zinc finger AN1-type profile. 104 150 IPR000058 GO:0008270
Eupl01g01255 169 ProSiteProfiles Zinc finger A20-type profile. 10 44 IPR002653 GO:0003677|GO:0008270
Eupl01g01255 169 PANTHER AN1-TYPE ZINC FINGER PROTEIN 13 169 - -
Eupl01g01255 169 SMART A20_3 13 37 IPR002653 GO:0003677|GO:0008270
Eupl01g01255 169 SMART AN1_Zf_4 110 147 IPR000058 GO:0008270
Eupl01g01255 169 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 15 61 - -
Eupl01g01255 169 Gene3D - 1 64 - -
Eupl01g01255 169 Pfam A20-like zinc finger 14 37 IPR002653 GO:0003677|GO:0008270
Eupl01g01255 169 SUPERFAMILY AN1-like Zinc finger 94 164 IPR035896 -
Eupl01g01255 169 Gene3D - 87 165 IPR035896 -
Eupl01g01255 169 FunFam Zinc finger AN1-type containing 6 92 165 - -
Eupl01g01255 169 Pfam AN1-like Zinc finger 110 146 IPR000058 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g01255 Eupl-Chr1 32560083 32562274 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g01255 1 169 C2H2 Transcription Factor Family AT3G52800 50.279 7.13e-53 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g01255 - - nnu:104588284 243.047