LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Eupl01g01233	ATGAGAAGTTATTGCATGGCGGGCCATAGAGTTGGAGAGACTGATCTTTCAGATTCAGGTCCCTCAAATCAACAAATACCATATGCTATGCTTCATGCGATCACTAGCTCTCCTGCCAGCAATTTCATTAATCAACAAGGATCTGCTTTTGATTTTGGGGAGCTAGAAGAGGCAATTGTCCTTCAAGGAGTGAAGTTTAGCAATGATGAAACCAAAAAACCTTTTTTCACAAATAGACCAGCTGCTACTCTGGAAATGTTTCCTTCATGGCCAATGAGATTCCAACCAACTCCCAGAGGAAGTTCAAAATCAGGAGGAGAGAGTACTGATTCAGGATCTGCTCATAATACTCTTTCCTATAACGCTGATGCTCACTTGGAACCAGAATCTCCTATCAGCAAAAAAGCATCAGATCAAAAGCAGCAGCAACAACAACAGCAACTAGTAGAGATGGCAAGTGATACCTCCAGAACAGGCCCACTACAGAATCAACAACCGAAAACTCTAGAAAAGAGGAAGGGAGCTGGTTCAACTTCAGATAAACCGCCCGATGACAAGACATTGAGACGTTTAGCTCAGAATAGAGAGGCAGCAAGGAAGAGTCGACTGAGAAAAAAGGCTTACGTACAACAGCTAGAATCTAGTAGGATAAAGCTTACTCAACTAGAGCAAGATCTTCAAAGAGCAAGATCCCAGGGTCTTTTCTTAGCAGCAGGTGGTGGTGCAGGTGGAAATCTCAGCTCTGGTGCTGCGGTGTTTGACATGGAGCATGCAAGATGGTTAGAAGACGACCATAGACATATGTTGGAGCTCCGGACGGGGTTGCAAGCACGCCTATCTGACGGTGATCTGAGGTTGATACTGGACGGATATCTTGCCCACTATGATGAGATCTTCCGGCTCAAAGGAGTCGCAACCAAATCCGACGTCTTCCATTTGATCACCGGAATGTGGACAACTCCAGCTGAGCGCTGCTTCCTCTGGATGGGTGGCTTTAGACCATCCGAACTCCTCAAGATATTAATGCCTCAACTAGACCCATTAACGGAGCAGCAATTGATGGGCATATGTAGCCTCCAACAATCCTCACAACAGGCAGAGGAGGCTCTCTCCCAGGGTCTTGACCAACTCCATCAGTCTCTGGCCGACACCATCACCAGCGGACCTCTCAACGATGCGACCAATGTCGCAAATTACATGGGTCAGATGGCACTCGCATTGAACAAGCTCTCCAACCTCGAAGGATTTGTCCGCCAGGCTGATAATTTGAGACAGCAAACCCTTCATCAGATGCATCGGATTTTGACAGTTCGACAAGCAGCTCGATGTTTTTTGGCGATCGGGGAGTATTATAGCCGACTACGAGCGCTTAGTTCCCTCTGGGTATCTCGACCACGAGAGAACATGATCAGCGACGATAGCTCGTGCCAGACAACCACGGATTTGCAAATGGTTCAACCCCCACACAACCATTTTTCGACATTTTGA	1488	0.4698	MRSYCMAGHRVGETDLSDSGPSNQQIPYAMLHAITSSPASNFINQQGSAFDFGELEEAIVLQGVKFSNDETKKPFFTNRPAATLEMFPSWPMRFQPTPRGSSKSGGESTDSGSAHNTLSYNADAHLEPESPISKKASDQKQQQQQQQLVEMASDTSRTGPLQNQQPKTLEKRKGAGSTSDKPPDDKTLRRLAQNREAARKSRLRKKAYVQQLESSRIKLTQLEQDLQRARSQGLFLAAGGGAGGNLSSGAAVFDMEHARWLEDDHRHMLELRTGLQARLSDGDLRLILDGYLAHYDEIFRLKGVATKSDVFHLITGMWTTPAERCFLWMGGFRPSELLKILMPQLDPLTEQQLMGICSLQQSSQQAEEALSQGLDQLHQSLADTITSGPLNDATNVANYMGQMALALNKLSNLEGFVRQADNLRQQTLHQMHRILTVRQAARCFLAIGEYYSRLRALSSLWVSRPRENMISDDSSCQTTTDLQMVQPPHNHFSTF*	496

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Eupl01g01233	495	CDD	bZIP_HBP1b-like	186	232	-	-
	Eupl01g01233	495	Coils	Coil	205	232	-	-
	Eupl01g01233	495	Pfam	Seed dormancy control	267	342	IPR025422	GO:0006351\|GO:0043565
	Eupl01g01233	495	MobiDBLite	consensus disorder prediction	87	117	-	-
	Eupl01g01233	495	SMART	brlzneu	182	248	IPR004827	GO:0003700\|GO:0006355
	Eupl01g01233	495	ProSiteProfiles	Basic-leucine zipper (bZIP) domain profile.	184	228	IPR004827	GO:0003700\|GO:0006355
	Eupl01g01233	495	MobiDBLite	consensus disorder prediction	173	189	-	-
	Eupl01g01233	495	MobiDBLite	consensus disorder prediction	135	172	-	-
	Eupl01g01233	495	MobiDBLite	consensus disorder prediction	95	117	-	-
	Eupl01g01233	495	ProSitePatterns	Basic-leucine zipper (bZIP) domain signature.	189	204	IPR004827	GO:0003700\|GO:0006355
	Eupl01g01233	495	PANTHER	TRANSCRIPTION FACTOR TGA9	133	467	-	-
	Eupl01g01233	495	Pfam	bZIP transcription factor	185	227	IPR004827	GO:0003700\|GO:0006355
	Eupl01g01233	495	Gene3D	-	185	234	-	-
	Eupl01g01233	495	ProSiteProfiles	DOG1 domain profile.	250	464	IPR025422	GO:0006351\|GO:0043565
	Eupl01g01233	495	FunFam	BZIP family transcription factor	185	234	-	-
	Eupl01g01233	495	MobiDBLite	consensus disorder prediction	1	23	-	-
	Eupl01g01233	495	MobiDBLite	consensus disorder prediction	131	189	-	-
	Eupl01g01233	495	SUPERFAMILY	Leucine zipper domain	186	228	IPR046347	GO:0003700\|GO:0006355

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Eupl01g01233	Eupl-Chr1	32304670	32310914	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Eupl01g01233	166	495	bZIP Transcription Factor Family	AT1G08320	73.333	9.72e-177	499

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	bZIP	Eupl01g01233		DOG1	5.7e-29	No_clan

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Eupl01g01233	K14431		-	nnu:104588531	712.605