Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g01210 ATGGATACATCAAGCCCGGCTGTTTTTGTCAATGCAGAGATGTTGCCAATGTATGTAGGACGAAAGGTTCGAGCAGTGGTTCAGGTACCGCGATCTGAAGATGGAGTCATTGTGGGGAAATCTACTGATGAACGCCAACTAATTATAAAAGGCAATTTGCCCCCGACCCCTTTGACAAATTTTGTTGAGGTGATTGGTATTGCCGACAGCAACCAGTCCATTTGTGCTGAGATATTCACCAACTTTGGTGACACGTTTGGTATGACATTCAACCCCTCTCTGTTTTTTTTTTTTGGGAGGCCAAACCTTACTTGTTTTGCAGCCCACTTGAGTGGCTCGAGCCATGACTAA 351 0.4501 MDTSSPAVFVNAEMLPMYVGRKVRAVVQVPRSEDGVIVGKSTDERQLIIKGNLPPTPLTNFVEVIGIADSNQSICAEIFTNFGDTFGMTFNPSLFFFFGRPNLTCFAAHLSGSSHD* 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g01210 116 SUPERFAMILY Nucleic acid-binding proteins 5 84 IPR012340 -
Eupl01g01210 116 Gene3D - 2 95 IPR012340 -
Eupl01g01210 116 PANTHER REPLICATION PROTEIN A 14 KDA SUBUNIT A-RELATED 1 90 - -
Eupl01g01210 116 Pfam Replication factor A protein 3 1 88 IPR013970 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g01210 Eupl-Chr1 32061387 32063580 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g01210 1 86 Core DNA Replication Machinery Family AT4G18590 58.140 5.55e-33 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g01210 K10740 - vvi:100264936 135.961