Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g01209 ATGGCGGTTATTCAAGTAACAGCTCCAACTTCAACTCTTGTTCTCAGCGAATTCAAAACAAAACAGACTAATTTGACTTTTCAATCGAAAGTTTTCCTGAAAACCTCATTCAAGACCTGTAATTCCTGCAAATCATCTTCGTTTCCTCTCGTAGTTCCTTCGAATTCCCTCAGTCGCGACAAGAAATCTCGATCCGATAGCTTTGCACTTTCCCTTCCTTCTTTAGATCCTATAAAACCCTTCGTTCAATCGGAATGGAGATCAATTCTCAAGGGTTGGATCTGCAGTGTCATCTCTGTCTACTGCCTCTCTAAGGTTGTCCCTAAAGTCGGAAAATTCTCTGAAGTTCTGAGTAAGATCGATGCGAATCGATTGACAGAGGAGGGTTTGGAGCTGGGGGTTTTGGTTTTGGTCCGTGTGGTTGCTAATTACTGGCAGCAAGCTTTCCTGTGGGACGCCGCGTTGAATTCGGCGAATAAGATAAGGGTTCATGTTTTTGAGAGGGTCTTGCAGAGGGATTTGGGATTTTTCGAAGGTAGAGGTAGTGTTTCATCCGGCGACATTGCGTTTAGGATCACTGGAGAGGCTTCCGATGTCGCCGACACTGTGTATGCTCTGTTGAATACCATTGTACCAAGTACCCTGCAGTTAACAGCAATGGCAACTCAGATGTTGGTGGTCAGCCCTGTCCTTTCATTGATTTCAGCCTTGGTCATTCCATGCATGTCTCTTGTCATTGCCTATCTCGGTGAAAGGCTTCGTAAGATATCTGCAAAGGCACACCTTAGTGTGGCTAGGCTATCCACTTACCTGAATGAGGTCCTCCAATCAATGCTTTTTGTGAAGGCAAACAATGCAGAGCTGTGTGAAAGTGCAAGGTTTCAAAAGCTTGCACATGCTGACCTATCTGAACATTTGAAAAAGAAGAAAATGAAGGCACTCATTCCTCAGATTATACAAGTTATATATGTTGGAGTGTTGTTGATACTTTGTGTTGGTTCTTTGGTGGTTTCGAGAGGTTCTTTCAATAGTTCTAGCATGGTTTCTTTCATAACATCATTGGTTCTCTTGCTAGAGCCGATCCAGGGTGTTGGAAAAGCATACAACGAGTTGAAGCAAGGAGAGCCAGCTATAGAACGCTTGTTTGATTTAACCACGTTCAGCTCTCAGGTGATTGAGAAACCGGATGCAGTTGATTTAGACTCTGTTACAGGGGACGTGAAATTTTGTGACATCTCTTTCAAATATGGAGATAATATGCCTCTTTTTTTAAATGGATTGAATCTCCATATCCAACCTGGAGAAACAGTTGCTCTTGTTGGGCCTTCTGGAGGGGGAAAGACAACCCTCACAAAACTGCTTCTTCGCCTTTATGATCCTCTATGTGGTTTTATACTTATTGATAATCATAATATTCAATGCATCCGATTGGAAAGTCTAAGACGACATGTTGGTTTAGTTTCTCAAGATATAACACTTTTCTCAGGCACAGTTGCTGAAAACATTGGCTATCGGGATTTGATGAGCCAAATCGACATGGAGCGGGTTGAGCATGCGGCAAGGACTGCAAATGCTGATGAATTCATTAGAGCCCTTTCAGAAGGGTATGAAACTAATATTGGTCAGAGGGGCTCAATTTTGAGTGGTGGCCAGAAGCAGAGGCTAGCTATTGCAAGGGCAATCTATCAGAAATCCTCTATACTGATTTTGGATGAAGCAACTTCTGCTTTAGATAGCAAGTCCGAGCTGTTGGTGAGACAAGCTGTGGAGCGTTTAATGGAAAACCATACTGTGCTTGTGATCGCCCACAGATTGGAAACTGTTCTAATGGCTGACCGAATCGTCATCCTAGAAAATGGGAAGTTGGTGGAGGTAACCCGCACATCTCTTTTAACTGAGGGTAGTCACTATGGCTCGCTTATGTCAAGTGGAATTGTGATATAA 1944 0.4316 MAVIQVTAPTSTLVLSEFKTKQTNLTFQSKVFLKTSFKTCNSCKSSSFPLVVPSNSLSRDKKSRSDSFALSLPSLDPIKPFVQSEWRSILKGWICSVISVYCLSKVVPKVGKFSEVLSKIDANRLTEEGLELGVLVLVRVVANYWQQAFLWDAALNSANKIRVHVFERVLQRDLGFFEGRGSVSSGDIAFRITGEASDVADTVYALLNTIVPSTLQLTAMATQMLVVSPVLSLISALVIPCMSLVIAYLGERLRKISAKAHLSVARLSTYLNEVLQSMLFVKANNAELCESARFQKLAHADLSEHLKKKKMKALIPQIIQVIYVGVLLILCVGSLVVSRGSFNSSSMVSFITSLVLLLEPIQGVGKAYNELKQGEPAIERLFDLTTFSSQVIEKPDAVDLDSVTGDVKFCDISFKYGDNMPLFLNGLNLHIQPGETVALVGPSGGGKTTLTKLLLRLYDPLCGFILIDNHNIQCIRLESLRRHVGLVSQDITLFSGTVAENIGYRDLMSQIDMERVEHAARTANADEFIRALSEGYETNIGQRGSILSGGQKQRLAIARAIYQKSSILILDEATSALDSKSELLVRQAVERLMENHTVLVIAHRLETVLMADRIVILENGKLVEVTRTSLLTEGSHYGSLMSSGIVI* 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g01209 647 CDD ABC_6TM_exporters 142 381 - -
Eupl01g01209 647 ProSitePatterns ABC transporters family signature. 547 561 IPR017871 GO:0005524|GO:0016887
Eupl01g01209 647 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 407 644 IPR003439 GO:0005524
Eupl01g01209 647 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 129 637 IPR039421 -
Eupl01g01209 647 FunFam ABC transporter ATP-binding protein 400 640 - -
Eupl01g01209 647 Gene3D ABC transporter type 1, transmembrane domain 60 387 IPR036640 GO:0005524|GO:0016020
Eupl01g01209 647 SMART AAA_5 433 621 IPR003593 GO:0016887
Eupl01g01209 647 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 396 642 IPR027417 -
Eupl01g01209 647 Gene3D - 397 645 IPR027417 -
Eupl01g01209 647 Pfam ABC transporter transmembrane region 125 360 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Eupl01g01209 647 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 132 373 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Eupl01g01209 647 Pfam ABC transporter 424 575 IPR003439 GO:0005524
Eupl01g01209 647 FunFam ABC transporter related 76 387 - -
Eupl01g01209 647 SUPERFAMILY ABC transporter transmembrane region 78 385 IPR036640 GO:0005524|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g01209 Eupl-Chr1 32049711 32058302 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g01209 113 636 Calmodulin-binding Proteins AT2G36910 30.922 3.25e-62 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g01209 K02021 - nnu:104588808 900.197