Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g01208 ATGGCACCGAAGAAGGATAAGGCTCCTCCTCCATCTTCCAAGCCCGCCAAATCTGGCGGAGGGAAGCAGAAGAAGAAGAAATGGAGCAAGGGAAAACAAAAGGAAAAGGTGAACAACATGGTTTTGTTCGATCAGGGGAGTTACGACAAGCTTCTTTCAGAAGTTCCCAAGTACAAGCTCATTACGCCTTCGATCTTGTCTGACAGATTGAGGATTAATGGATCGCTGGCACGTAGGGCAATCAAGGATTTGATGGCGAGAGGCTCCATCAGGATGATATCTGCTCATGCTAGCCAGCAGATTTACACCAGAGCCACAAATACCTAG 327 0.4771 MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGSYDKLLSEVPKYKLITPSILSDRLRINGSLARRAIKDLMARGSIRMISAHASQQIYTRATNT* 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g01208 108 Pfam S25 ribosomal protein 7 105 IPR004977 -
Eupl01g01208 108 Gene3D - 21 108 - -
Eupl01g01208 108 PANTHER 40S RIBOSOMAL PROTEIN S25 1 108 IPR004977 -
Eupl01g01208 108 MobiDBLite consensus disorder prediction 1 36 - -
Eupl01g01208 108 FunFam 40S ribosomal protein S25 21 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g01208 Eupl-Chr1 32042470 32048362 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g01208 1 107 Cytoplasmic Ribosomal Protein Gene Family AT4G34555 88.785 1.88e-53 161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g01208 K02975 - ncol:116266964 159.844