Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g01176 ATGTGGGGAACTGCAGAAGGAAGTCCTCCAGAGGTCACTCTCGAGACCTCCATGGGTTCTTTAACTGTTGAGCTATACTACAAGCACGCCCCAAGAACTTGCAGAAACTTCATAGAACTTTCTCGAAGGGGTTATTACGACAATGTCAAATTTCACCGAATTATCAAGGATTTTATCGTGCAAGGCGGAGATCCCACTGGGACAGGGAGAGGGGGCGAATCGATCTATGGTTCAAAGTTTGAAGATGAGATAAAACCTGAGTTAAAGCATACGGGAGCTGGTATTCTTTCCATGGCAAATGCAGGTCCAAATACGAATGGAAGTCAGTTCTTCATTACCCTGGCACCTACTCAATCACTGGATGGAAAACATACAATTTTTGGGAGAGTCTGTAGGGGGATGGAAATCATCAAAAGACTTGGCAGTATCCAAACTGATAATAATGATAGACCCATCCATGACGTGAAGATATTGCGAACCGCGGTCAAAGATTGA 495 0.4424 MWGTAEGSPPEVTLETSMGSLTVELYYKHAPRTCRNFIELSRRGYYDNVKFHRIIKDFIVQGGDPTGTGRGGESIYGSKFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLAPTQSLDGKHTIFGRVCRGMEIIKRLGSIQTDNNDRPIHDVKILRTAVKD* 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g01176 164 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 46 63 IPR020892 GO:0003755|GO:0006457
Eupl01g01176 164 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED 9 161 IPR044666 -
Eupl01g01176 164 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 15 162 IPR002130 GO:0000413|GO:0003755
Eupl01g01176 164 Gene3D - 3 164 IPR029000 -
Eupl01g01176 164 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 122 137 IPR002130 GO:0000413|GO:0003755
Eupl01g01176 164 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 51 63 IPR002130 GO:0000413|GO:0003755
Eupl01g01176 164 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 109 121 IPR002130 GO:0000413|GO:0003755
Eupl01g01176 164 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 94 109 IPR002130 GO:0000413|GO:0003755
Eupl01g01176 164 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 25 40 IPR002130 GO:0000413|GO:0003755
Eupl01g01176 164 FunFam Peptidyl-prolyl cis-trans isomerase 2 164 - -
Eupl01g01176 164 PIRSF Peptidylpro_ismrse 5 164 IPR024936 GO:0003755
Eupl01g01176 164 SUPERFAMILY Cyclophilin-like 12 162 IPR029000 -
Eupl01g01176 164 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 12 161 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g01176 Eupl-Chr1 31707503 31712035 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g01176 12 162 U-box Gene Family AT5G67530 49.007 1.69e-50 168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g01176 K12733 - nnu:104589285 322.783