Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g01159 ATGGAGGCACAACCCGCCGAAAAACGCCGACGAGTCAAGATAGACCAACACGCTAAAATCGAGAGAAGTGGCTGCAGAATCAGAATTCCGGCCACCTGTGCTCCCGGTATCTTCCAGCTGACTCAGGAACTCGGTCTCCGATCGGACGGAGAAACGATTCAGTGGCTCTTAGAGCAGGCTCGGCCCGAACTCGTTCTCCAACGAACCGTTTCTTCAAAGAACGTTCCCAGAGTAAACTCGGCAAACGCTTCCGCTCCCAGTCCCATCGCTTTCGCTTACCCGAAAGATAGTGTAAATGGAAAAATTACGGCTTTGGTTTCTGTTCCGAACGGCGGGGGACCGGCGATGACAGCCGGGGAAGCCGACGCGGAGTCTGATCCCGGTCCGCGGCCTACGGTTCGAGCCACTGTGGTACAAGCTTCAACCGTCTTCTACGACACTCCGGCGACATTAGATAAAGCAGAGAGACTGATTGCAGGTGCTGCTGCATATGGATCGCAATTAGTTGTGTTTCCAGAGGCATTCGTTGGGGGTTATCCCCATATTTCCAACTTTGGTGTTACAGAGGGAAGCCATTCAACTGAGGGAAACGAGGAGTTGCGGAAGTATCACGCTTCTGCCATTGATGTGCCTGGTCCTGAAGTTGACCGACTAGCATCAATTGCTCAAAAGTATAAAGTTCATTTAGTAATGGGAGTGGTAGAGAGAGAAGGATTCACGTTCTATAGCACACTTTTGTATTTTGATTCCCAGGGCCAGTATTTTGGAAAACACCGCAAGTTCCTGCCAATGTCATCAGAAAACACAATATGGTGTTCTGGAGACAAACCAACACCGGCTGTTTACAAGACCCCAGTTGGAAAGATTGGTGGCCTCATCTGCTGGGATAATAGAATGCCTCCTTTAAGAACAGAATTGTATGCTAAAGGAATTGAAATATATTGTGCACCCACATCAGATGCCAGGGATGTATGGCGGTCATCCATGATCCACATTGCCCTTGAGGGTGGATGCTTCGTTCTATCTGCCAACCAGTTTTGCCAAAGGAAAGACTATCCGCTTCCACCCGAATGTGTATCCAGAGATGAAGACAGAGACCTCTCTCCGGACTCAATTGTGTGTGCTGGAGGGAGTGTCATTATTTCGCCAACAGGGGCCATTTTGGCGGGACCCAATTACCAAGGAGAGTCCCTCATATCGGCTGATCTAGATCTTGGAGAAATTGCACGAGCGAAGCTAGATTTCAATGCAGTCGGAACTGTGGGACGCTGA 1272 0.4969 MEAQPAEKRRRVKIDQHAKIERSGCRIRIPATCAPGIFQLTQELGLRSDGETIQWLLEQARPELVLQRTVSSKNVPRVNSANASAPSPIAFAYPKDSVNGKITALVSVPNGGGPAMTAGEADAESDPGPRPTVRATVVQASTVFYDTPATLDKAERLIAGAAAYGSQLVVFPEAFVGGYPHISNFGVTEGSHSTEGNEELRKYHASAIDVPGPEVDRLASIAQKYKVHLVMGVVEREGFTFYSTLLYFDSQGQYFGKHRKFLPMSSENTIWCSGDKPTPAVYKTPVGKIGGLICWDNRMPPLRTELYAKGIEIYCAPTSDARDVWRSSMIHIALEGGCFVLSANQFCQRKDYPLPPECVSRDEDRDLSPDSIVCAGGSVIISPTGAILAGPNYQGESLISADLDLGEIARAKLDFNAVGTVGR* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g01159 423 ProSiteProfiles TCP domain profile. 13 67 IPR017887 -
Eupl01g01159 423 ProSitePatterns Nitrilases / cyanide hydratase signature 1. 165 180 IPR000132 GO:0003824
Eupl01g01159 423 Gene3D - 128 416 IPR036526 -
Eupl01g01159 423 Pfam Carbon-nitrogen hydrolase 134 412 IPR003010 GO:0006807
Eupl01g01159 423 SUPERFAMILY Carbon-nitrogen hydrolase 131 420 IPR036526 -
Eupl01g01159 423 Pfam TCP family transcription factor 13 67 IPR017887 -
Eupl01g01159 423 PANTHER NITRILASE 122 421 IPR044149 GO:0003824
Eupl01g01159 423 ProSiteProfiles Carbon-nitrogen hydrolase domain profile. 133 405 IPR003010 GO:0006807
Eupl01g01159 423 CDD nitrilases_CHs 133 419 IPR044149 GO:0003824
Eupl01g01159 423 MobiDBLite consensus disorder prediction 112 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g01159 Eupl-Chr1 31455277 31470301 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g01159 9 65 TCP Transcription Factor Family AT3G27010 59.649 2.29e-16 77.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Eupl01g01159 CN_hydrolase 3e-58 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g01159 K13035 - nnu:104589516 577.785