Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Eupl01g01155 | ATGGGCCGGGTGCGCACAAAGACCGTGAAGAAGTCCTCTCGACAGGTGATCGAGAGGTACTACTCCCGAATGACCTTAGATTTCCACACGAACAAAAAGATATTGGAGGAGGTTGCAATCATTCCGTCGAAGCGCCTCCGGAACAAGATAGCAGGGTTCTCGACTCACCTCATGAAGCGCATCCAAAGAGGCCCAGTTCGTGGGATCTCTCTGAAACTCCAAGAGGAGGAGCGGGAGCGTCGCATGGACTTCGTTCCAGACGAATCCGCCATCAAGACGGATCTCATCGAGGTCGACAAGGAGACCATCGACATGCTCGCAGCCCTCGGCATGTCTGACCTCCCTGGCGTCGTCAAGCAAGCTGAGCCCAATCTCGCTCCTGCACCAGCTTTCGGGAGGGGCGGTGCTGGTGGACCGGGGAGAAGATACTGA | 432 | 0.5648 | MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQRGPVRGISLKLQEEERERRMDFVPDESAIKTDLIEVDKETIDMLAALGMSDLPGVVKQAEPNLAPAPAFGRGGAGGPGRRY* | 144 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Eupl01g01155 | 143 | Pfam | Ribosomal S17 | 1 | 119 | IPR001210 | GO:0003735|GO:0005840|GO:0006412 | |
Eupl01g01155 | 143 | Gene3D | - | 1 | 62 | IPR036401 | GO:0003735|GO:0005840|GO:0006412 | |
Eupl01g01155 | 143 | ProSitePatterns | Ribosomal protein S17e signature. | 41 | 56 | IPR018273 | GO:0003735|GO:0005840|GO:0006412 | |
Eupl01g01155 | 143 | SUPERFAMILY | Rps17e-like | 1 | 62 | IPR036401 | GO:0003735|GO:0005840|GO:0006412 | |
Eupl01g01155 | 143 | Hamap | 30S ribosomal protein S17e [rps17e]. | 1 | 63 | IPR001210 | GO:0003735|GO:0005840|GO:0006412 | |
Eupl01g01155 | 143 | PANTHER | 40S RIBOSOMAL PROTEIN S17 | 1 | 124 | IPR001210 | GO:0003735|GO:0005840|GO:0006412 | |
Eupl01g01155 | 143 | FunFam | 40S ribosomal protein S17 | 1 | 62 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Eupl01g01155 | Eupl-Chr1 | 31350412 | 31351592 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Eupl01g01155 | 1 | 143 | Cytoplasmic Ribosomal Protein Gene Family | AT5G04800 | 83.217 | 1.18e-80 | 232 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Eupl01g01155 | K02962 | - | nnu:104601439 | 236.884 |