Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g01155 ATGGGCCGGGTGCGCACAAAGACCGTGAAGAAGTCCTCTCGACAGGTGATCGAGAGGTACTACTCCCGAATGACCTTAGATTTCCACACGAACAAAAAGATATTGGAGGAGGTTGCAATCATTCCGTCGAAGCGCCTCCGGAACAAGATAGCAGGGTTCTCGACTCACCTCATGAAGCGCATCCAAAGAGGCCCAGTTCGTGGGATCTCTCTGAAACTCCAAGAGGAGGAGCGGGAGCGTCGCATGGACTTCGTTCCAGACGAATCCGCCATCAAGACGGATCTCATCGAGGTCGACAAGGAGACCATCGACATGCTCGCAGCCCTCGGCATGTCTGACCTCCCTGGCGTCGTCAAGCAAGCTGAGCCCAATCTCGCTCCTGCACCAGCTTTCGGGAGGGGCGGTGCTGGTGGACCGGGGAGAAGATACTGA 432 0.5648 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQRGPVRGISLKLQEEERERRMDFVPDESAIKTDLIEVDKETIDMLAALGMSDLPGVVKQAEPNLAPAPAFGRGGAGGPGRRY* 144
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g01155 143 Pfam Ribosomal S17 1 119 IPR001210 GO:0003735|GO:0005840|GO:0006412
Eupl01g01155 143 Gene3D - 1 62 IPR036401 GO:0003735|GO:0005840|GO:0006412
Eupl01g01155 143 ProSitePatterns Ribosomal protein S17e signature. 41 56 IPR018273 GO:0003735|GO:0005840|GO:0006412
Eupl01g01155 143 SUPERFAMILY Rps17e-like 1 62 IPR036401 GO:0003735|GO:0005840|GO:0006412
Eupl01g01155 143 Hamap 30S ribosomal protein S17e [rps17e]. 1 63 IPR001210 GO:0003735|GO:0005840|GO:0006412
Eupl01g01155 143 PANTHER 40S RIBOSOMAL PROTEIN S17 1 124 IPR001210 GO:0003735|GO:0005840|GO:0006412
Eupl01g01155 143 FunFam 40S ribosomal protein S17 1 62 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Eupl01g01155 Eupl-Chr1 31350412 31351592 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g01155 1 143 Cytoplasmic Ribosomal Protein Gene Family AT5G04800 83.217 1.18e-80 232
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g01155 K02962 - nnu:104601439 236.884