Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g01130 ATGCCTTCTTCGTCTTCTTTAACTCTCATCTCTAGATGCTCCGTTTTTCCTGATCAGAAATCTTCTATTGGATATCTCAAACTCTCCGTCTCTGATCTTCCCATGCTCTCTTGCCATTATATTCAAAAGGGCGTTTTATTTACTCGTCCTCCTCTCCCTATGGACGCTCTTCTCGCTCTCCTTAAGCGTGGTCTCTCCCAGACTCTCACGCACTTTCCGGCACTTGCCGGCCGTCTTACAACAGATTCCGATGGGTTCGTTCACGTCTCCTGCAACGACGCTGGTGTCGACTTTATCCATGCCAATGCTGGACACGTTTCCATCCGTGACATTCTCTCCCCCGTCCACGTGGCTAAAGAGTTCTTCGCCTTAGACGGAACGGTCAGCTACGACGGACATTTTAAGCCGATAGCGGCTGTTCAAGTGACAGAACTTGCTGACGGCGTCTTCATCGGGTGCGCCGTTAACCACGCTGTTACGGATGGGACGTCGTTCTGGAACTTCTTCAACACGTTTGCGGAGGTTTGTAGAGGAGTGGAGAAGATCTCAAGGCAACCGGATTTTCGCCGAAATTTCGTGAAAGATTCACCGGCGGTGCTTAGATTCCCTGATGGAGCTCCGAAGGTGACGTTTGACGTCGATGCGCCGTTACAAGAGAGAATTTTTCATTTCAGCAGAGAAGCGATTCTCAAGCTGAAATCGAGAGCGAATGCTCTATCGTGGAAGCAGCTGGATAACGGGCTTCCTGACGCCATTGAAATACTGGGGAAGCAAAGTAACGACAGCTGGAAGATCCATGTATCAGAGAACCAGAATTGTAACGGAAAGATAACGTCGGTTCTGGAGGGCTGGTTGAGGAACGCCGTTTCGAAACCTCAAGATTCTGAAATCCCCAATCAGACGGTTGAGATATCATCTTTCCAGTCTCTCAGTGCTCAGCTCTGGCGTTCGATCACACGTGCGAGAAAGTTTGCACCGTCCAAACCAACCACGTTTCGAATGGCTGTAAATTGTCGTCACCGGCTCGAGCCGCGGCTCGATCAGTACTACTTCGGGAACGCAATACAGAGCATCCCGACCGTAGCTTCCGCAGGTGAGATCCTATCCCGGGATCTGCGCTGGTGCGCAGGTTTGCTACATCGAAACGTCGCTGCTCACGATGACGCTACTGTGCGCCGTTTTGTTGAGGATTGGGAGAAGAACCCACGGTGTTTCCCGCTAGGGAACTTCGACGGTGCAGCAATCACGATGGGGAGTTCTCCGAGATTCCCAATGTATGATAATGATTTCGGGTGGGGCCGACCGCTGGCTGTTCGGAGCGGGCGAGCGAACAAATTTGACGGTAAGATATCGGCGTTTCCAGGTAGAGAAGGTGGTGGGAGCGTTGATCTGGAGGTGTGTTTGGCACCCGATACGATGATGGGTCTGGAGACCGATACGGAGTTCATGCAGTACGTATCGGCGGTAGCATGA 1473 0.5166 MPSSSSLTLISRCSVFPDQKSSIGYLKLSVSDLPMLSCHYIQKGVLFTRPPLPMDALLALLKRGLSQTLTHFPALAGRLTTDSDGFVHVSCNDAGVDFIHANAGHVSIRDILSPVHVAKEFFALDGTVSYDGHFKPIAAVQVTELADGVFIGCAVNHAVTDGTSFWNFFNTFAEVCRGVEKISRQPDFRRNFVKDSPAVLRFPDGAPKVTFDVDAPLQERIFHFSREAILKLKSRANALSWKQLDNGLPDAIEILGKQSNDSWKIHVSENQNCNGKITSVLEGWLRNAVSKPQDSEIPNQTVEISSFQSLSAQLWRSITRARKFAPSKPTTFRMAVNCRHRLEPRLDQYYFGNAIQSIPTVASAGEILSRDLRWCAGLLHRNVAAHDDATVRRFVEDWEKNPRCFPLGNFDGAAITMGSSPRFPMYDNDFGWGRPLAVRSGRANKFDGKISAFPGREGGGSVDLEVCLAPDTMMGLETDTEFMQYVSAVA* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g01130 490 Gene3D - 7 201 IPR023213 -
Eupl01g01130 490 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 9 484 - -
Eupl01g01130 490 Pfam Transferase family 6 483 - -
Eupl01g01130 490 SUPERFAMILY CoA-dependent acyltransferases 24 178 - -
Eupl01g01130 490 Gene3D - 216 483 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g01130 Eupl-Chr1 31064453 31066079 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g01130 60 477 Monolignol Biosynthesis Gene Families AT5G48930 24.941 1.29e-31 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g01130 - - nnu:104601220 781.171