Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g01125 ATGGATGTTATCAAGACGCAGCAGATCTCGGCGAGGCCGATTGAGAAGGTCATAGTTCACCCTCTTGTTCTTCTGAGCATCGTCGATAACTATAACAGAGTCGCGAGGGATACTCGGAATAAACGTGTTATTGGTGTTCTACTCGGGAGCTCTTTCAAAGGCACCGTTGATGTCACCAACAGTTATGCAGTACCCTTTGAAGAAGATGACAAGGATCCAAGCATCTGGTTTCTTGACCACAATTACCATGAATCAATGTTTTCTATGTTCAAGAGAATAAATGCCAAGGAGCATGTTGTAGGTTGGTACAGCACAGGTCCGAAACTGCGGGAAAATGACCTGGATATTCACGGATTATTCCATGACTATGTTCCCAATCCTGTTTTGGTCATTATCGACGTCCAACCTAAGGAGCTGGGGATACCTACCAAGGCTTATTATGCTGTCGAAGAGGTCAAAGAGAATGCCACTCAAAAAAGTCAGAAGGTTTTTGTTCACGTGCCTTCAGAAATTGCCGCTCATGAAGTTGAGGAAATCGGAGTGGAGCACTTGCTCAGGGATGTGAAGGATACAACCATTAGCACACTTGCAACAGAGGTTACTGGCAAACTTGCAGCTTTGAAGGGGCTGGATGCACGACTCCGAGAGATACGTGGTTATCTTGATCTTGTTGTTGATGGAAAGCTCCCATTAAATCACGAGATTCTGTACCATTTACAGGACGTGTTTAACCTACTTCCTAATCTCAACGTGGCTGAGTTAATCAAGGCTTTTGCAGTGAAAACAAATGATATGATGCTGGTCATATATCTTTCTTCCCTCATCCGGAGTGTAATTGCTCTCCACAACCTGATCAACAACAAGATGCTCAACAAAGAACACGAGAAAGCTGAAGATGCGAAGCCATCGGCTATACCAGCTGCGGCGGGGAGCTAG 936 0.4498 MDVIKTQQISARPIEKVIVHPLVLLSIVDNYNRVARDTRNKRVIGVLLGSSFKGTVDVTNSYAVPFEEDDKDPSIWFLDHNYHESMFSMFKRINAKEHVVGWYSTGPKLRENDLDIHGLFHDYVPNPVLVIIDVQPKELGIPTKAYYAVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDVKDTTISTLATEVTGKLAALKGLDARLREIRGYLDLVVDGKLPLNHEILYHLQDVFNLLPNLNVAELIKAFAVKTNDMMLVIYLSSLIRSVIALHNLINNKMLNKEHEKAEDAKPSAIPAAAGS* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g01125 311 ProSiteProfiles MPN domain profile. 17 155 IPR037518 -
Eupl01g01125 311 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 15 125 IPR000555 GO:0005515|GO:0008233|GO:0008237
Eupl01g01125 311 CDD MPN_RPN7_8 15 296 IPR033858 GO:0005838
Eupl01g01125 311 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F-RELATED 12 294 - -
Eupl01g01125 311 Gene3D Cytidine Deaminase, domain 2 9 195 - -
Eupl01g01125 311 FunFam 26S proteasome non-ATPase regulatory subunit 7 9 195 - -
Eupl01g01125 311 SMART pad1_6 16 151 IPR000555 GO:0005515|GO:0008233|GO:0008237
Eupl01g01125 311 Pfam Maintenance of mitochondrial structure and function 175 286 IPR024969 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g01125 Eupl-Chr1 31014056 31026664 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g01125 19 249 Eukaryotic Initiation Factors Gene Family AT2G39990 30.213 1.52e-26 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g01125 K03038 - vvi:100247677 602.438