LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Eupl01g01124	ATGGACGAAGGAATGTCAGGTTTTTGTATTAAAGCGGGAGGTGGAGGTGGTGGTGGTAATGGAGGAGGAGGAACAAAGTGTGGGCGTTGGAATCCGACCACTGAACAGGTTAAAGTTCTGACTGATCTGTTCAGATCTGGGCTCCGAACTCCGAGCACTGATCAGATCCAAAAGATCTCTTCTCAGCTGAGCTTTTACGGTAAGATCGAGAGCAAGAACGTCTTCTACTGGTTCCAGAACCATAAAGCCAGAGAAAGACAGAAACGCCGGAGAATATCTATCGAAGACCGAGGTTTGATCGAGCGAGAAGACAAATTCGTAACTGCAAAACATTTTACAGAGATAGATCAGGTTTCAGAGCCGGAAAGGACGATCGAAACGCTGCAGCTCTTTCCGTTGAACTCTTGCGAGGACTCTGAAACGGATAAGCTTAGATTACTGAAAAACCAATGCAAAGAGACGATGACGTTCTCGTGTGCGATCGGGAAAGAGATTAACTATCCACCGTTAGATCTGCGTTTAAGCTTTGTTTAA	534	0.4569	MDEGMSGFCIKAGGGGGGGNGGGGTKCGRWNPTTEQVKVLTDLFRSGLRTPSTDQIQKISSQLSFYGKIESKNVFYWFQNHKARERQKRRRISIEDRGLIEREDKFVTAKHFTEIDQVSEPERTIETLQLFPLNSCEDSETDKLRLLKNQCKETMTFSCAIGKEINYPPLDLRLSFV*	178

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Eupl01g01124	177	ProSiteProfiles	'Homeobox' domain profile.	23	88	IPR001356	GO:0003677
	Eupl01g01124	177	Gene3D	-	26	93	-	-
	Eupl01g01124	177	CDD	homeodomain	29	89	IPR001356	GO:0003677
	Eupl01g01124	177	PANTHER	WUSCHEL-RELATED HOMEOBOX 1-RELATED	15	97	IPR044555	GO:0003700\|GO:0099402
	Eupl01g01124	177	Pfam	Homeodomain	27	87	IPR001356	GO:0003677
	Eupl01g01124	177	FunFam	WUSCHEL-related homeobox 11	26	94	-	-
	Eupl01g01124	177	SUPERFAMILY	Homeodomain-like	28	90	IPR009057	-
	Eupl01g01124	177	SMART	HOX_1	25	92	IPR001356	GO:0003677

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Eupl01g01124	Eupl-Chr1	31002957	31003762	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Eupl01g01124	7	177	Wox Gene Family	AT3G11260	57.297	7.67e-63	190

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	HB-WOX	Eupl01g01124		Homeodomain	3.1e-18	CL0123

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Eupl01g01124	-		-	nnu:104596975	264.233