Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Eupl01g01122 | ATGGCAGCGAGCGAGCAAACGGTGTTGCAGTTCTTCCCTTCGTCGACGAGCTTGTCTGCGAAGGTTCACCCCGTCGTCATCTTCAACATCTGCGATTGCTACGTTAGGCGCCCAGATCAAGCAGAAAGAGTGATCGGTACTCTTCTCGGTTCGATCTCCCCAGATGGCACCGTCGATATTCGGAACTCGTATGCGGTTCCTCACAACGAGTCTTCCGATCAGGTTGCGTTGGATATTGATTACCATCATAACATGTTGCTGTCTCACCAAAAGGTGAATCCAAAGGAAGTCATTGTCGGATGGTATTCAACAGGCTTTGGGGTCTCAGGGGGGAGTGCATTGATCCATGAATTCTATTCAAGAGAAGTACAAAACCCAGTTCATTTGACTGTCGATACGGGATTCAGGAATGGAGAAGCTACCATCAAAGCTTTCGTTTCTGTCAACTTGTCTCTGGGAGATCGGCAGCTTGCCGCACAATTTCAAGAAACTCCTCTGGATCTGCGGATGGTTGAAGCAGAGCGAGTTGGATGTATGAATTTGTCCTCTCACTGTGGTTCCTGTTTTTACTTGAGCTCATTCATCATTGTTGCCTCTTTATGCATGGTTGATATTCTAAAGACGACAATGGTAGACAAGCTCCCTAATGATTTGGAAGGAATGGAAGCCTCAATGGAGAGACTGCTTGCTCTTATTGACGATGTCTACAAATATGTTGACAATGTTGTGGAACGGCGTGTTGCACCAGACAATAACACTGGAAGATTCATATCAGAAACTGTAGCTTCCGTACCAAAAATGTCAGCTGCAGCTTTTGATAAGCTAGTAAATGACAATCTTCAGGACCATTTACTACTACTATATTTGTCAAGCCTCACAAGGACGCAGCTTGGCTTAGCAGAGAAGTTGAACACAGCTGCTCAGATTCTTTAA | 933 | 0.4544 | MAASEQTVLQFFPSSTSLSAKVHPVVIFNICDCYVRRPDQAERVIGTLLGSISPDGTVDIRNSYAVPHNESSDQVALDIDYHHNMLLSHQKVNPKEVIVGWYSTGFGVSGGSALIHEFYSREVQNPVHLTVDTGFRNGEATIKAFVSVNLSLGDRQLAAQFQETPLDLRMVEAERVGCMNLSSHCGSCFYLSSFIIVASLCMVDILKTTMVDKLPNDLEGMEASMERLLALIDDVYKYVDNVVERRVAPDNNTGRFISETVASVPKMSAAAFDKLVNDNLQDHLLLLYLSSLTRTQLGLAEKLNTAAQIL* | 311 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Eupl01g01122 | 310 | Hamap | Eukaryotic translation initiation factor 3 subunit F [EIF3F]. | 18 | 306 | IPR027531 | GO:0003743|GO:0005852|GO:0006413|GO:0031369 | |
Eupl01g01122 | 310 | CDD | MPN_eIF3f | 21 | 303 | IPR027531 | GO:0003743|GO:0005852|GO:0006413|GO:0031369 | |
Eupl01g01122 | 310 | FunFam | Eukaryotic translation initiation factor 3 subunit F | 9 | 185 | - | - | |
Eupl01g01122 | 310 | ProSiteProfiles | MPN domain profile. | 20 | 151 | IPR037518 | - | |
Eupl01g01122 | 310 | Pfam | Maintenance of mitochondrial structure and function | 208 | 303 | IPR024969 | - | |
Eupl01g01122 | 310 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F-RELATED | 14 | 307 | - | - | |
Eupl01g01122 | 310 | SMART | pad1_6 | 19 | 150 | IPR000555 | GO:0005515|GO:0008233|GO:0008237 | |
Eupl01g01122 | 310 | Gene3D | Cytidine Deaminase, domain 2 | 11 | 185 | - | - | |
Eupl01g01122 | 310 | Pfam | JAB1/Mov34/MPN/PAD-1 ubiquitin protease | 18 | 124 | IPR000555 | GO:0005515|GO:0008233|GO:0008237 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Eupl01g01122 | Eupl-Chr1 | 30989409 | 30998755 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Eupl01g01122 | 2 | 310 | Eukaryotic Initiation Factors Gene Family | AT2G39990 | 70.253 | 5.66e-150 | 421 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Eupl01g01122 | K03249 | - | nnu:104610487 | 483.411 |