Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g01104 ATGGAAAACAGAATCCAAAGTACAGGTCGGACTTCAGAACCTTGTGAAGGCAATGAATCTATCCACAACACCAATGAAGCAAAAATCGGAATAGGCGAAGGAGAGGAAGCATATGATGGAGTAGATACAAAGCGAGAAAATGATGGAAATGAGGATGGAAAAAATGAAGAATATGGTGAAGGGAAGGAGGAAGAAAATAATGTAGATGATATATTAAAACCATATGTTGGTATGGTGTTTGATTCTGAAGAGCATGCATTTCAATTTTACAACAATTACGCAAGAGAGAAGGGATTCAGCATACGAAGAGGACATGTTCGTAGATCAATGAAAAATAATGCGATCATAAGTCGGAAACTATTTTGTTCTAAGGAAGGGTTTCGAGAGGAAAAATACAAAAGGAATGTTGCAAGTAAAAAAAAGCATTTCGGTGAAACAAGAATTGGTTGTCAAGCAAGGCTTGTAGTTAAGCTACAAGCAGACAATGGTACTTGGGTTGTCACTATCTTTGAAGAGAAACATAACCACAAATTTGAGACTCAGAGGAAGCGTTATCTACAACCACCAGCGAGGAATATCAATGAAAGTCAAGGGGTTTTTTTGATTGATAAAATGAATACAGAAACAGTAAAAACAAATCTAATGGTGCACTACCTGTCTAAAGAAGCTGGGGGGATCAAAAATGCTAATTTTGTCGAAAGAGATGCCGTGAATGGCTTGAACACTAAACATAATAAGGACGTTAAAAAGGGAGATGCACAAGCTGTGTTAGATTACTTTATTGACATGCAGATGGAGAATCCAAATTTTTTTTATGCAGTTCAACTTAATTCAGATGGTCAAATGACTAATTTCTTTTGGGCTGATGTGTGGTCAAGGATGGATTATGGTTATTTTGGGGATGTGGTGTGTATTGACACTACATACGGGACAAATAGGTACAAAATGCCATTTGTTCCAATTGTTGGTGTAAATCATCATTTGCAAACATCGTACTTTGGGGGCGCGGTAATTTTAGATGAAACCGAAGCTTCCTTTGTGTGGTTGCTAGAAACATGGATGAAGGCAATGAATGGATGTCATACAAAGACCATTTTTACTAATCAAGATTCAACTATTACGGGAGCAATCACATGTGTCTTGCCACATGCTCACCATCGTTTTTGCTTATGGCATGTATTTCAGAATGCCCAAAAGCATTTGGGTCATTTATATAGGCAAAGTTCTAGCTTTGCAGGAGATTTTTCCAAATGCATATATGACAATGAAACAGTTGAAGAGTTCGAGTCAGGCTGGGAGTCATTGCTTACCACATATAATTTACATAAAAATGAGTGGATGTCGAGACTATATGGTATGCGTCAACAATGGGTGCCAATTTACTCACATGGTATATTTTGTGCAGATATGTCAACAACACAACGCAGTGAGAGCATTGACAAGTTTTTCAAAGATTTCTTAAAAAGAGACATGGTACTTCAAGATTTCGTCAAGGCGGTTGATAGAGCGCTTGTTAGTCGGCGTGAAGAGGAAATAAAAGCTGATTTTTATGACAACCAAGTACTTCCACCCTTACTATTACACATGCAGATTGAAGAAGATGCAGGAAAGATCTATACCACGTCAGTGTTCAAAAAATTTCAAGAGGAGTTAATTTTAAGTCTTCGTTTCATGTGTGAAAAAATTGACGAGGATGGGACCACATCAATATTTAAGTGCTGGCTTGACAATAGGCAATGCATTGTCAAACTTCACTCACATGGTTTTAGTGGTAAGTGTAGTTGCCAAAGGTTTGAGTATACGGGCATCTTATGTAGACACGTATTGAAGGTGTTTATTGTAACTAATGTTGTCCGAGTTCAGCCACAGCACATCTTAAAGAGGTGGACAAGAGATGCAAAATGTGGAGTAGTGAAAAATGAAGAGAGTGAACAAATGCAAGCTGATTGCCAAATGTCTTTATCATTACGATATAGTAGCCTTTGTCGGCAAGGAATGAATATAACAGTCAAGGGTGCGTCATCAACAGAAGTGTATAAAGTGGCTATGCATTGGCTACAAAAGACACTCTTGGAGGTGGAAAATGCATTAAAAAGAGTGTCTACTGAAAGCACTGGAAGTAACAAAAGAAAGAGGGAGTGCTCAATGTCCAGAGGGAAGTGGAACGGAAATGGGACCGAGGATGCAACTGAAACACAAGCCCACGAATTCTAA 2214 0.383 MENRIQSTGRTSEPCEGNESIHNTNEAKIGIGEGEEAYDGVDTKRENDGNEDGKNEEYGEGKEEENNVDDILKPYVGMVFDSEEHAFQFYNNYAREKGFSIRRGHVRRSMKNNAIISRKLFCSKEGFREEKYKRNVASKKKHFGETRIGCQARLVVKLQADNGTWVVTIFEEKHNHKFETQRKRYLQPPARNINESQGVFLIDKMNTETVKTNLMVHYLSKEAGGIKNANFVERDAVNGLNTKHNKDVKKGDAQAVLDYFIDMQMENPNFFYAVQLNSDGQMTNFFWADVWSRMDYGYFGDVVCIDTTYGTNRYKMPFVPIVGVNHHLQTSYFGGAVILDETEASFVWLLETWMKAMNGCHTKTIFTNQDSTITGAITCVLPHAHHRFCLWHVFQNAQKHLGHLYRQSSSFAGDFSKCIYDNETVEEFESGWESLLTTYNLHKNEWMSRLYGMRQQWVPIYSHGIFCADMSTTQRSESIDKFFKDFLKRDMVLQDFVKAVDRALVSRREEEIKADFYDNQVLPPLLLHMQIEEDAGKIYTTSVFKKFQEELILSLRFMCEKIDEDGTTSIFKCWLDNRQCIVKLHSHGFSGKCSCQRFEYTGILCRHVLKVFIVTNVVRVQPQHILKRWTRDAKCGVVKNEESEQMQADCQMSLSLRYSSLCRQGMNITVKGASSTEVYKVAMHWLQKTLLEVENALKRVSTESTGSNKRKRECSMSRGKWNGNGTEDATETQAHEF* 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g01104 737 MobiDBLite consensus disorder prediction 701 737 - -
Eupl01g01104 737 SMART 26again6 591 618 IPR006564 GO:0008270
Eupl01g01104 737 Pfam SWIM zinc finger 591 614 IPR007527 GO:0008270
Eupl01g01104 737 Pfam MULE transposase domain 302 396 IPR018289 -
Eupl01g01104 737 Pfam FAR1 DNA-binding domain 88 178 IPR004330 -
Eupl01g01104 737 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 62 695 IPR031052 GO:0006355
Eupl01g01104 737 MobiDBLite consensus disorder prediction 1 25 - -
Eupl01g01104 737 MobiDBLite consensus disorder prediction 32 67 - -
Eupl01g01104 737 MobiDBLite consensus disorder prediction 1 67 - -
Eupl01g01104 737 ProSiteProfiles Zinc finger SWIM-type profile. 578 616 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g01104 Eupl-Chr1 30679477 30681765 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Eupl01g01104 MULE 3.3e-25 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g01104 - - nnu:104598451 748.814