Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g01094 ATGGCCACCACCACAGCTGCTGCAACGTCGTCTTTCTTGGGAACTCGCTTGCACGATGTTCACTCCAACTCGGGCAAGTTTCAAGCCCGATTCGGATTTGGATCAAAGAAATCGCCCCCAAAGAAGACCCTGAAGCCGAGTACAGATCGCCCGCTCTGGTTTCCCGGTGCGAAAGCGCCCGAGTACCTCGACGGGAGTCTAGTGGGTGACTACGGGTTCGACCCATTCGGATTGGGGAAACCGGCCGAGTACTTGCAGTTCGAGTTGGACTCGTTGGACCAGAACTTGGCTAAGAACCCTGCGGGTGATATCATCGGGACTCGATTCGAGACCTCGGACGTGAAGTCGACTCCATTCCAGCCGTACACCGAGGTGTTTGGACTGCAACGATTCCGTGAGTGCGAACTCATTCATGGGAGGTGGGCCATGCTCGCTACACTCGGTGCACTCGCTGTTGAGTCACTCACCGGAGTCACCTGGCAAGACGCGGGAAAGGTGGAGCTGGTTGAGGGGTCATCCTACCTGGGCCTTCCTCTTCCCTTCTCCATAACCACATTGATATGGATCGAGGTGCTAGTGATTGGATACATTGAGTTCCAAAGGAACGCAGAGCTTGACCCGGAAAAGAGGTTGTACCCGGGTGGAAAGTTCTTTGATCCCCTCGGTTTGGCCGCTGATCCGGAGAAGAAGGCTACCCTTCAATTGGCGGAGATCAAGCATGCCCGGCTGGCCATGGTTGGCTTCCTTGGCTTTGCCGTCCAAGCTGCGGCTACCGGCAAAGGCCCACTCAACAACTGGGCTACCCACTTGAGTGACCCACTTCACACAACCATCTTTGACACCTTCTCCTCTTAA 855 0.5556 MATTTAAATSSFLGTRLHDVHSNSGKFQARFGFGSKKSPPKKTLKPSTDRPLWFPGAKAPEYLDGSLVGDYGFDPFGLGKPAEYLQFELDSLDQNLAKNPAGDIIGTRFETSDVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALAVESLTGVTWQDAGKVELVEGSSYLGLPLPFSITTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAADPEKKATLQLAEIKHARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLHTTIFDTFSS* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g01094 284 Gene3D Chlorophyll a/b binding protein domain 53 284 - -
Eupl01g01094 284 FunFam Chlorophyll a-b binding protein, chloroplastic 107 284 - -
Eupl01g01094 284 Pfam Chlorophyll A-B binding protein 59 255 IPR022796 -
Eupl01g01094 284 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 5 281 IPR001344 GO:0009765|GO:0016020
Eupl01g01094 284 MobiDBLite consensus disorder prediction 30 50 - -
Eupl01g01094 284 SUPERFAMILY Chlorophyll a-b binding protein 46 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g01094 Eupl-Chr1 30576979 30580137 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g01094 12 284 Chloroplast and Mitochondria Gene Families AT3G08940 85.036 9.87e-174 479
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g01094 K08915 - jre:108994925 529.635