Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g01093 ATGTCGGTCTCATGGGAAGCCAGCGTCACAGACTCAATCAACACCATTTATCTCCTCTTCTCTGCCTACCTTGTCTTTGTAATGCAGCTCGGCTTCGCCATGCTCTGCGCCGGCTCAGTCCGAGCCAAGAACACCATGAACATAATGCTCACCAATGTCGTTGATGCTGTCGTCGGTAGCATCTCTTACTATCTCTTTGGTTTCGCTTTTGCCTTTGGTGTCTCCAACCCTTTTATTGGCTCTCACTTCTTCGCTCTCAAAGACATCCCCAATGACACGTATGACTACTCTTTCTTTCTCTATCAATGGGCTTTTGCTATCGCAGTTGCTGGAATTACTAGTGGTTCTATAGCTGAGCGGACTCAGTTCAGTGCCTACCTCGTTTTCTCCTTCTTCCTCACTGGTTTCGTTTACCCCATTGTCGCTCATTGGGTTTGGTCATCAACCGGTTGGCTCAGCCCAAGTTCATCTGAGTTGCTTTTCGGGTCCGGCGCTATTGACTTCGCCGGTAGTGGGGTGGTCCACTTGGTGGGTGGAATTGCCGGTTTGTGGGGTGCGTTCATAGAAGGCCCAAGAGTTGGACGGTTTGACGCATTTGGCCAGCCTGTGCCAATGCGTGGACACAATGCAACTCTAGTCGTACTCGGCACATTCTTGTTGTGGTTCGGGTGGTTCGGGTTCAACCCGGGTTCGTTCGACAAGATACTTGTTTCATACCCAAACACAACCAATCAAGGTAATTGGACCGGTGTGGGTCGGACTGCAGTCACCACTACATTAGCCGGTTCAACTGCCGGAATTGTGACGTTATTCGGCCGACGATTACTAGTGGGTCACTGGGATGCTTTGGATGTGTGTAATGGCGTGCTTGGTGGGTTTGTTGCGATCACATCCGGATGCTCGGTGGTCGAGCCATGGGCTGCGATCTTGTGCGGGTTCGTTGCGGCTTGGGTCTTGATTGGGCTAAATGTGTTGGCACTCAAATTAAAGTTCGATGACCCATTAGAGGCGACTCAATTGCATGGTGGGTGTGGGGCATGGGGTCTGATATTTACGGGTTTGTTTGCCAAGGAGGAATTTGTAATTCAAGCTTACAATTCGGGTGAAAGCGGTGTGGTGCGCCCATTTGGAGTCTTGATGGGTGGGGGTTGGGGGTTGCTTGCAGCCCAAGTGATAGAGGTCTTAGTGATTGTGGGTTGGGTGAGTATGACCATGGGGCCTCTCTTCTATGCTCTTCATAAGCTCAGGATTTTAAGGATATCGGTTGACGACGAAGTCGCAGGGCTTGATATCTCTAGTCACGGCGGGTACGCATATGTCGCCCATCATGAAGAAAACCAACCTCGATTTTACGCCGATTACATGAGGATGCAAGCAGCGGGAACATGA 1389 0.5061 MSVSWEASVTDSINTIYLLFSAYLVFVMQLGFAMLCAGSVRAKNTMNIMLTNVVDAVVGSISYYLFGFAFAFGVSNPFIGSHFFALKDIPNDTYDYSFFLYQWAFAIAVAGITSGSIAERTQFSAYLVFSFFLTGFVYPIVAHWVWSSTGWLSPSSSELLFGSGAIDFAGSGVVHLVGGIAGLWGAFIEGPRVGRFDAFGQPVPMRGHNATLVVLGTFLLWFGWFGFNPGSFDKILVSYPNTTNQGNWTGVGRTAVTTTLAGSTAGIVTLFGRRLLVGHWDALDVCNGVLGGFVAITSGCSVVEPWAAILCGFVAAWVLIGLNVLALKLKFDDPLEATQLHGGCGAWGLIFTGLFAKEEFVIQAYNSGESGVVRPFGVLMGGGWGLLAAQVIEVLVIVGWVSMTMGPLFYALHKLRILRISVDDEVAGLDISSHGGYAYVAHHEENQPRFYADYMRMQAAGT* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g01093 462 FunFam Ammonium transporter 1 454 - -
Eupl01g01093 462 NCBIfam ammonium transporter 14 439 IPR001905 GO:0008519|GO:0016020|GO:0072488
Eupl01g01093 462 Pfam Ammonium Transporter Family 18 439 IPR024041 GO:0008519|GO:0016020|GO:0072488
Eupl01g01093 462 Gene3D Ammonium transporter AmtB like domains 3 458 IPR029020 -
Eupl01g01093 462 SUPERFAMILY Ammonium transporter 10 420 - -
Eupl01g01093 462 PANTHER AMMONIUM TRANSPORTER 10 435 - -
Eupl01g01093 462 ProSitePatterns Ammonium transporters signature. 167 192 IPR018047 GO:0008519|GO:0016020|GO:0072488
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g01093 Eupl-Chr1 30565796 30567428 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g01093 7 446 Inorganic Solute Cotransporters AT1G64780 69.799 0.0 623
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g01093 K03320 - ming:122067495 851.662