Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g01085 ATGGCCTCACATGATCCCTGCAACTTGGAGGACGGCAACCTCAAGGGCTCAAGCAAGGAGATCCGGCACGGACGGACGGCGCACAACATGTCGTCTTCCTCACTGCGCAAGAAGTCGGATCTCGTGCTTGTGTCCAAGGTGCCGTGTGGACTCCTACGACAATTCCTGACTAACCTCCAGGAAGTCATCTTGGGAACCAAGCTCTCCATTCTATTCCCAGCCATCCCTCTAGCTATCGTCGCCAAATATTGTAGTTTTGGAGAACCATGGATTTTTGCTTTGAGTTTACTTGGGCTCACCCCACTTGCTGAACGTGTTAGCTTTCTCACCGAACAAATTGCATACTACACTGGTCCAACAGTTGGAGGGCTTCTTAATGCAACATGTGGTAACGTAACGGAGCTCATAATAGCATTATTTGCTCTATATCAAAGAAAAGTAGATGTTGTGAAGTACTCTCTTTTGGGTTCCATTCTTTCGAACCTTCTTCTTGTTCTTGGGACTTCTCTTTTCTGTGGAGGCTTAGCCAACTTAAGAAAGGAACAAAAATATGATAGAAAGCAAGCAGACGTGAACTCGCTACTCCTGTTGCTGGCTTTGTTGTGCCACATGCTTCCTCTGATGTTCAGATATGCTGCTAACCCCAGCACTCTCACGGCCGTCCCTACTCTCCAGATGTCGAGAGTAAGCAGTATCGTCATGCTAATTGCCTACACGGCGTATCTCTTCTTCCAATTGAAGACTCATCGGCAACTTTTCGAAGCGCAAGAGGAAGAAGATGGTGATGATGTGAATTCCGATGAGCAGGCCGTGATAGGATTCTGGAGTGGATTTGCATGGCTGGCTGGAATGACGATCATCATAGCTTTGTTATCTGAGTATGTCGTGGGTACAATCGAGGATGCATCAAATACTTGGGGAGTTTCTGTCAGCTTCATCAGCATAATCTTGCTACCCATCGTCGGAAACGCTGCTGAACACGCCGGTGCGGTCATATTCGCTTTTAAGAACAAGTTGGATATATCTTTAGGTGTTGCTTTGGGTTCTGCAGCTCAAATTTCTATGTTTGTGGTTCCCTTAAACGTGCTCGTTGCGTGGATAATGGGTATCGACATGGATCTTGATTTTAATCTCCTTGAGACTGGTTCTTTGGCTTTAGCAATACTGGTCACAACCTTCACTTTACAGGACGGGACTTCACATTACATGAAAGGACTGGTTCTCCTGCTTTGCTACATTGTTATCGGGACGTGCTTTTTCGTCCTCAAAACTCCACTCAAACCAACAAATGTACTCAACTTGGGAGTTGAATCATCATCTGGAGGAGTCCTGATAGCTTAA 1341 0.4609 MASHDPCNLEDGNLKGSSKEIRHGRTAHNMSSSSLRKKSDLVLVSKVPCGLLRQFLTNLQEVILGTKLSILFPAIPLAIVAKYCSFGEPWIFALSLLGLTPLAERVSFLTEQIAYYTGPTVGGLLNATCGNVTELIIALFALYQRKVDVVKYSLLGSILSNLLLVLGTSLFCGGLANLRKEQKYDRKQADVNSLLLLLALLCHMLPLMFRYAANPSTLTAVPTLQMSRVSSIVMLIAYTAYLFFQLKTHRQLFEAQEEEDGDDVNSDEQAVIGFWSGFAWLAGMTIIIALLSEYVVGTIEDASNTWGVSVSFISIILLPIVGNAAEHAGAVIFAFKNKLDISLGVALGSAAQISMFVVPLNVLVAWIMGIDMDLDFNLLETGSLALAILVTTFTLQDGTSHYMKGLVLLLCYIVIGTCFFVLKTPLKPTNVLNLGVESSSGGVLIA* 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g01085 446 Gene3D - 119 259 IPR044880 -
Eupl01g01085 446 Gene3D - 265 420 IPR044880 -
Eupl01g01085 446 MobiDBLite consensus disorder prediction 1 33 - -
Eupl01g01085 446 FunFam Vacuolar cation/proton exchanger 119 263 - -
Eupl01g01085 446 NCBIfam calcium/proton exchanger 54 420 - -
Eupl01g01085 446 NCBIfam calcium/proton exchanger 73 420 IPR004798 GO:0006816|GO:0015369
Eupl01g01085 446 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 21 423 IPR004713 GO:0006812|GO:0008324|GO:0016020
Eupl01g01085 446 Pfam Sodium/calcium exchanger protein 277 415 IPR004837 GO:0016020|GO:0055085
Eupl01g01085 446 Pfam Sodium/calcium exchanger protein 90 246 IPR004837 GO:0016020|GO:0055085
Eupl01g01085 446 FunFam Vacuolar cation/proton exchanger 265 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g01085 Eupl-Chr1 30480630 30485727 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g01085 10 425 Antiporters AT2G38170 72.877 0.0 594
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g01085 K07300 - nnu:104601262 686.797