Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g01076 ATGTTCTCGTCATTCTTCCATGATATATCAAGGTATAGCCTGCCTCGGAGATTATTACATCGGTCGGCTTGGCATCCAAAGAGAAAGTGGGAGAAAGAAGAGATGGCCACCACAACTAAGCTTCTATCAGTCACGCTTCTATGGCTTCTCGCCTTGTTTGGAACCCTAGCTGTCATTCAGAATCGGTTAAGCAATGCAGGAGAATCGTCCGATCGAAACGAGATCGACAGCGAGCTCGATCAGGCAAAGAAGTCGAAGGAGGATTTGAAGGAAGTGACACACAAAGTATACTTCGATATCGAGATCGGTGGCAAGCCTGCTGGTCGCGTTGTCATTGGCCTCTTTGGGAAAACAGTTCCTAAAACTGCAGAAAATTTTCGAGCACTATGCACAGGGGAGAAAGGTATTGGGAAGAGTGGGAAGCCTCTCCACTACAAGGGGAGCACATTCCATAGGATTATTCCCAGCTTTATGATCCAGGGAGGTGATTTTACACTTGGAGATGGAAGAGGTGGAGAGTCGATCTACGGTGAGAAGTTTGCTGATGAGAACTTCAAACTAAAGCACACCGGACCAGGATTTCTGTCAATGGCGAATGCAGGTCGGGACACCAACGGTTCTCAGTTCTTCATCACGACTGTAACGACTAGCTGGTTGGACGGCAAACATGTCGTGTTTGGCAAGGTGATATCTGGGATGGATGTGGTTTACAAGGTAGAAGCAGAAGGGAAACAGAATGGCACACCAAAAAGCAAAGTTGTCATTGCAGACAGTGGCGAGCTTCCCTTGTGA 792 0.4747 MFSSFFHDISRYSLPRRLLHRSAWHPKRKWEKEEMATTTKLLSVTLLWLLALFGTLAVIQNRLSNAGESSDRNEIDSELDQAKKSKEDLKEVTHKVYFDIEIGGKPAGRVVIGLFGKTVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMIQGGDFTLGDGRGGESIYGEKFADENFKLKHTGPGFLSMANAGRDTNGSQFFITTVTTSWLDGKHVVFGKVISGMDVVYKVEAEGKQNGTPKSKVVIADSGELPL* 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g01076 263 CDD cyclophilin_ABH_like 94 259 - -
Eupl01g01076 263 FunFam Peptidyl-prolyl cis-trans isomerase 89 262 - -
Eupl01g01076 263 Gene3D - 81 262 IPR029000 -
Eupl01g01076 263 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 97 260 IPR002130 GO:0000413|GO:0003755
Eupl01g01076 263 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 145 162 IPR020892 GO:0003755|GO:0006457
Eupl01g01076 263 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 95 261 - -
Eupl01g01076 263 SUPERFAMILY Cyclophilin-like 92 261 IPR029000 -
Eupl01g01076 263 Coils Coil 72 92 - -
Eupl01g01076 263 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 97 257 IPR002130 GO:0000413|GO:0003755
Eupl01g01076 263 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 208 220 IPR002130 GO:0000413|GO:0003755
Eupl01g01076 263 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 114 129 IPR002130 GO:0000413|GO:0003755
Eupl01g01076 263 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 221 236 IPR002130 GO:0000413|GO:0003755
Eupl01g01076 263 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 150 162 IPR002130 GO:0000413|GO:0003755
Eupl01g01076 263 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 193 208 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g01076 Eupl-Chr1 30273468 30278933 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g01076 108 240 U-box Gene Family AT5G67530 47.015 2.08e-27 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g01076 K01802 - nnu:104595041 388.267