Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g01067 ATGGCATCCTCATCCTCACTGGCACCTACAACTCCGCCTTCGAACACATCGCCTTCCAAACTTTTCCTTTTTCTTCCAACTCCTCTTCCTTTCTCTCTTCGGAGCTCCGCGTCTCTTTTCCATATCTATAACAGTTCTCCCACGACTCACTCAATCATGCAAGCCTCGGGAAGCTCCGTCACTGATTCAGATATGGGTTCGGATAGTTCCGGGAAACAACGCTTGCGCTGGACACAAGAGCTGCGTGATCGATTCGAAGAGGCAGTTAACCAGCTTGGTGGTGCAGATAGGGCAACACCGAAAGGTATATTGAAGGCTATGGCTCTCCCGGGACTCACTATCTATCATGTCAAAAGCCACTTGCAGAAATACAGGATTTCAAAGTTTATTCCAGAGTCTTTTGATAGAGGAAGGCTTGAGAGGAGAAAAGTTTCGGAAATGCTGCCCAATTTTAGTGCAACATCTGGTGCTCAGATTAATGAAGCCTTACAAATGCAGATGGAAGTAGAGAGGCGACTAAGCACTCAACTTGAGGTTCAGATGCACTTGAAACTTAGAATTGAAGCTCAAGGAAGATACCTAGAGAAGATTGCCGAGGAACATCGGAACCTTGGCGGCAATGGCGTCAAATTTCACAAGCCTTATTCCCTTCCCATATCACTACCTTCCCTTTGTGAGGAGTCTGAATCAAATGCAAGGGAATACGAATCCGATTCAGAAGTCGACATAACTGGAAGATTAAATCGAAAAATGTTCGATCGTTTTGGAAACCTAAGTCGAAGCACCAATATATCCGGTATATCACCGAGCATCCCATCACTATTTAGCCTGACAAGTAGAATTGATGCAGAAATATCGTCCGATGAAATTCGATATTGTAAGAGGCTAAGAGTGGATGATGACATGATTTCCCCTCCAACGTTCAATCTTCCATCACAAAGCTTGGAGCCTAACCAGCAGAAGATATTGGAAAGAATGCTTCTTCCGGAAGAAGTACAAATTTCAAATTCTACCCATGAAATTGCCTTTCCATGGCCAGTTACATCTGGTGAATCTTCTTCATTGTCCAGCTTCTGCTTATAA 1083 0.4414 MASSSSLAPTTPPSNTSPSKLFLFLPTPLPFSLRSSASLFHIYNSSPTTHSIMQASGSSVTDSDMGSDSSGKQRLRWTQELRDRFEEAVNQLGGADRATPKGILKAMALPGLTIYHVKSHLQKYRISKFIPESFDRGRLERRKVSEMLPNFSATSGAQINEALQMQMEVERRLSTQLEVQMHLKLRIEAQGRYLEKIAEEHRNLGGNGVKFHKPYSLPISLPSLCEESESNAREYESDSEVDITGRLNRKMFDRFGNLSRSTNISGISPSIPSLFSLTSRIDAEISSDEIRYCKRLRVDDDMISPPTFNLPSQSLEPNQQKILERMLLPEEVQISNSTHEIAFPWPVTSGESSSLSSFCL* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g01067 360 SUPERFAMILY Homeodomain-like 71 126 IPR009057 -
Eupl01g01067 360 NCBIfam myb-like DNA-binding domain, SHAQKYF class 72 127 IPR006447 GO:0003677
Eupl01g01067 360 FunFam Two-component response regulator 68 129 - -
Eupl01g01067 360 Gene3D - 71 130 - -
Eupl01g01067 360 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 57 231 IPR044848 GO:0003700
Eupl01g01067 360 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 69 129 IPR017930 -
Eupl01g01067 360 Pfam Myb-like DNA-binding domain 75 125 IPR001005 -
Eupl01g01067 360 Pfam MYB-CC type transfactor, LHEQLE motif 158 202 IPR025756 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g01067 Eupl-Chr1 30093018 30095811 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g01067 61 200 G2-like Transcription Factor Family AT4G28610 51.064 6.86e-41 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Eupl01g01067 Myb_DNA-binding 5.9e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g01067 - - vri:117921109 268.855