Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g01065 ATGGGAAACTGTTGCAGATCTCCGGCTTCTGTCGCCAGAGAGGATGTCAAGTCTGATTTCTCTGTTCACGAACATGGCCGGAAAGATAGAGAAGCCGCTACTGGGAAGAAGATTATCACAGTGTTGAATGGGATTTCGAAGGAGGGGATTGAAGAGAAGTACTTGGTGGATAAGGAATTAGGGCGGGGGGAGTTTGGCGTGACTTATCTTTGTATCGATCGAGATACGAAGGAGCATTTGGCTTGTAAGTCGATTTCGAAGAGGAAGCTTCGGACAGCGGTGGATGTTGACGATGTGCGGCGAGAGGTGGCGATCATGAAGCACTTGCCCAATAATTCGAGTATTGTGACCTTGAAGGAGGCGTGTGAGGACAATAATGCGGTTCATTTGGTGATGGAATTGTGCGAGGGCGGGGAGCTTTTCGATAGGATCGTGGCTCGTGGTCGCTATACGGAGCGGGCGGCTGCTGCTGTTACTCGAACCATTGTGGAGGTTGTGCAACTCTGTCACAATCATGGTGTGATCCATAGGGACTTGAAGCCGGAGAATTTTTTGTTTGCAAACAGGAAGGAGAATTCCCCCTTGAAGGCCATTGATTTTGGGCTATCCATATTCTTCAAGCCTGGCGAAAGATTCTCAGAAATTGTTGGAAGTCCATACTATATGGCTCCAGAAGTGCTTAAGCGGAACTATGGACCAGAAATAGATATATGGAGTGCAGGCGTCATACTCTATATTTTATTATGTGGGGTTCCTCCATTTTGGGCTGAGTCAGAACAAGGGGTTGCTCAGGCAATTCTTCGTGGACTAATAGATTTCAAACGGGATCCATGGCCAAATGTTTCAGAGAGTGCTAAGAGTTTGGTTCGACAGATGTTGGAGGCTGACCCCAAACTTCGATTGACTGCAAAGCAAGTTCTTGAGCATCCTTGGCTCCAAAATGCTAAAAAAGCTCCGAATGTTCCTCTTGGAGATGTTGTCAAGTCTAGGCTTAAGCAATTTTCAATGATGAACAGGTTCAAGAGGAAAGCCCTAAGGGTTATTGCTGATCATTTATCCACTGAAGAAGTTGAAGACGTCAAAGAAGTGTTCAAGAAGATAGACACGGATAATGATGGTATTGTTTCAATTGAGGAGCTCAAAGCTGGACTTCAAAAGTTTGGATCCCAGCTTGCAGAGTCTGAAGTACAGATGCTTATCGAAGCTGTAGACACATTTGGGAAAGGAACACTGGACTGTGGAGAATTTGTTGCTGTGTCTCTCCATCTACAAAGGATGGCCAATGATGAGCATCTCCATAAGGCCTTCTCCTACTTTGATAAGAACAGTGATGGTTATATTGAGCTGGAGGAGCTCCAGGATGCCTTGATGGAAGATGGAGCCGACGACTGTGCAGATGTAGCAAACGACATCTTCCAAGAAGTAGACACTGACAAGGATGGACGAATCAGCTATGATGAATTCGTGGCAATGATGAAAACTGGAACGGACTGGAGAAAGGCTTCTCGACATTACTCGAGAGGGAGGTTTAACAGTCTCAGCATTAAGCTGATGAAGGACGGTTCTCTAAACCTGGGCAGTGAACAGTGA 1590 0.4604 MGNCCRSPASVAREDVKSDFSVHEHGRKDREAATGKKIITVLNGISKEGIEEKYLVDKELGRGEFGVTYLCIDRDTKEHLACKSISKRKLRTAVDVDDVRREVAIMKHLPNNSSIVTLKEACEDNNAVHLVMELCEGGELFDRIVARGRYTERAAAAVTRTIVEVVQLCHNHGVIHRDLKPENFLFANRKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVLKRNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLVRQMLEADPKLRLTAKQVLEHPWLQNAKKAPNVPLGDVVKSRLKQFSMMNRFKRKALRVIADHLSTEEVEDVKEVFKKIDTDNDGIVSIEELKAGLQKFGSQLAESEVQMLIEAVDTFGKGTLDCGEFVAVSLHLQRMANDEHLHKAFSYFDKNSDGYIELEELQDALMEDGADDCADVANDIFQEVDTDKDGRISYDEFVAMMKTGTDWRKASRHYSRGRFNSLSIKLMKDGSLNLGSEQ* 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g01065 529 FunFam Calcium-dependent protein kinase 7 321 496 - -
Eupl01g01065 529 Gene3D Transferase(Phosphotransferase) domain 1 140 320 - -
Eupl01g01065 529 SUPERFAMILY EF-hand 349 506 IPR011992 -
Eupl01g01065 529 Gene3D Phosphorylase Kinase; domain 1 55 139 - -
Eupl01g01065 529 ProSitePatterns EF-hand calcium-binding domain. 440 452 IPR018247 -
Eupl01g01065 529 SMART efh_1 359 387 IPR002048 GO:0005509
Eupl01g01065 529 SMART efh_1 467 495 IPR002048 GO:0005509
Eupl01g01065 529 SMART efh_1 431 459 IPR002048 GO:0005509
Eupl01g01065 529 SMART efh_1 395 423 IPR002048 GO:0005509
Eupl01g01065 529 ProSiteProfiles EF-hand calcium-binding domain profile. 463 498 IPR002048 GO:0005509
Eupl01g01065 529 Gene3D - 321 496 - -
Eupl01g01065 529 PANTHER SERINE/THREONINE-PROTEIN KINASE 47 488 - -
Eupl01g01065 529 ProSitePatterns EF-hand calcium-binding domain. 476 488 IPR018247 -
Eupl01g01065 529 Pfam Protein kinase domain 56 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl01g01065 529 ProSiteProfiles EF-hand calcium-binding domain profile. 427 462 IPR002048 GO:0005509
Eupl01g01065 529 CDD EFh 431 493 IPR002048 GO:0005509
Eupl01g01065 529 SMART serkin_6 54 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl01g01065 529 Pfam EF-hand domain pair 430 493 IPR002048 GO:0005509
Eupl01g01065 529 Pfam EF-hand domain pair 358 418 IPR002048 GO:0005509
Eupl01g01065 529 ProSiteProfiles Protein kinase domain profile. 54 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl01g01065 529 SUPERFAMILY Protein kinase-like (PK-like) 46 338 IPR011009 -
Eupl01g01065 529 CDD STKc_CAMK 53 311 - -
Eupl01g01065 529 FunFam calcium-dependent protein kinase 13 140 320 - -
Eupl01g01065 529 ProSitePatterns EF-hand calcium-binding domain. 368 380 IPR018247 -
Eupl01g01065 529 ProSitePatterns Serine/Threonine protein kinases active-site signature. 174 186 IPR008271 GO:0004672|GO:0006468
Eupl01g01065 529 ProSiteProfiles EF-hand calcium-binding domain profile. 355 390 IPR002048 GO:0005509
Eupl01g01065 529 ProSitePatterns Protein kinases ATP-binding region signature. 60 83 IPR017441 GO:0005524
Eupl01g01065 529 FunFam Calcium-dependent protein kinase 1 56 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g01065 Eupl-Chr1 30062858 30070497 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g01065 1 528 EF-hand Containing Proteins AT5G19450 66.292 0.0 735
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Eupl01g01065 Pkinase 1.4e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g01065 K13412 - vvi:100241961 949.888