Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g01064 ATGGACACGACAGATCGATTCCCTCAATGGAGTCTTCAAGAAACAAAGGAGTTCTTGAGCATCCGAGCAGAGCTTGATCGAACTTTCATGGAGACTAAACGCAACAAGCTTCTTTGGGAAATCATCTCTAATACTATGAAGGAGAAAGGTTACAACCGTAGCCCAGATCAGTGCAAGTGCAAATGGAAGAACCTTGTTACACGCTATAAGGGATGCGAGACTATGGAGCCGGAGACTATGAGGCAACAATTTCCATTCTATAACGAGCTTCAAGCGATCTTCACTGCTAGGATGCAGAGGATGTTATGGGTTGAAGCAGAAGGTAGTTCGAAAAAGAAAGGAGTTCGATTATCATCTGATGATGATGAGAACGAAGAAAGTGAAGAGGAGAATAAGAGTAGTAAGAAGAAGATCAGAAAGGGTAAGAGCAGTAATAATAATAATAATAATAATTTGCAAGAGATTTTGGAGGAGTTCATGAAGCAACAAAGACAAATGGAGGTGCAATGGCGAGAAGCAGCGGAAGCAAGAGAAAAGGAGAGAAGGATGAAAGAGATGGAGTGGCGACAAGCGATGGAGACTTTGGAGAAGGAGAGGTTTTTGATGGATAAGAGATGGAGGGAGAGAGAGGAGCAAAGACGGATGCGAGAGGAAATGAGGGCGGAGAAGAGGGATGCTCTTATTACAGCTCTTTTAGACAAGCTAATACGTGAAGACATGTAG 723 0.4302 MDTTDRFPQWSLQETKEFLSIRAELDRTFMETKRNKLLWEIISNTMKEKGYNRSPDQCKCKWKNLVTRYKGCETMEPETMRQQFPFYNELQAIFTARMQRMLWVEAEGSSKKKGVRLSSDDDENEESEEENKSSKKKIRKGKSSNNNNNNNLQEILEEFMKQQRQMEVQWREAAEAREKERRMKEMEWRQAMETLEKERFLMDKRWREREEQRRMREEMRAEKRDALITALLDKLIREDM* 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g01064 240 CDD GT1 8 73 - -
Eupl01g01064 240 MobiDBLite consensus disorder prediction 113 151 - -
Eupl01g01064 240 Coils Coil 117 137 - -
Eupl01g01064 240 Gene3D - 10 71 - -
Eupl01g01064 240 ProSiteProfiles Myb-like domain profile. 10 66 IPR001005 -
Eupl01g01064 240 Coils Coil 145 169 - -
Eupl01g01064 240 PANTHER FI21293P1 5 236 - -
Eupl01g01064 240 Pfam Myb/SANT-like DNA-binding domain 9 93 IPR044822 -
Eupl01g01064 240 FunFam Zinc finger and SCAN domain-containing 20 10 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g01064 Eupl-Chr1 30055260 30057571 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g01064 3 238 Trihelix Transcription Factor Family AT2G38250 59.921 2.67e-73 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Eupl01g01064 Myb_DNA-bind_4 1e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g01064 - - nnu:104602588 313.923