Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g01054 ATGGCTAATAGATCAGATGAGAGCATCGACAACAATGAGAACGAGACCTCCTTCGCGATCTTCTTCGAAAGCTGGCTCGACCGCCAAGCAAACTACCTAGACGAGCTCCTCTGGGCTCAAAGAAACTGTAATCAACAACACGAAGATGAGCTTAGAAGCCTAATTGCACGAGTCCTCTCACACTACCAACAATACTTCAAAACCAAATCCAGAGCAGTCGACGATGACGTTTTCTTCATGTTCTCCGGCACCTGGTGGAGCTCTTTCGAGCGAACATTGCTCTGGATTGCCGGCTTCAAACCCGCTGTACTGTTCCGAATCGTCGCCAACTCGGTCGGGACAGATCTCTCCGAGGAACAATTACAAAGATTGATAGGTTGA 381 0.4856 MANRSDESIDNNENETSFAIFFESWLDRQANYLDELLWAQRNCNQQHEDELRSLIARVLSHYQQYFKTKSRAVDDDVFFMFSGTWWSSFERTLLWIAGFKPAVLFRIVANSVGTDLSEEQLQRLIG* 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g01054 126 PANTHER DOG1 DOMAIN-CONTAINING PROTEIN 17 123 - -
Eupl01g01054 126 Pfam Seed dormancy control 34 109 IPR025422 GO:0006351|GO:0043565
Eupl01g01054 126 ProSiteProfiles DOG1 domain profile. 15 126 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g01054 Eupl-Chr1 29906888 29907268 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g01054 18 126 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT5G06839 32.432 1.07e-16 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g01054 - - qsu:112005591 134.035