Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Eupl01g01047 | ATGGTTACTGAGCGGCCGATGAAACGCAACAGTGAAGAAGCAAACAGAAAGCTTTTTGTTGGAGAGAAAGTCGAGGTGAGGAGTATCGACGAAGGGTTCGGAGGTTCTTGGCATTCTGCAACTATCATTGCCTGCAATGATTCAGTCCGTCACGTTAGGTACGAGCATCTTCTGCTTGATGATCGCTCCGACAGACTCACTGAACTGATCCGAGTTTCTCCTATGATCGAAGGTGTTGTCCCTGAAGGTGGGACCCCCATAAATTACCGTGGCATGATAAGGCCGATACCTCCTCCCTTTAAAATCCCTCAATGGAGTCTCCATTTTGGACTCTGTGTAGACGCTCTTGTAAACGACGCTTGGTGGGAAGGCGTGATCTTCGATCATGAAGATGGTTCAGAGGAGAGGTTGGTTTTGTTCCCGGACTTGGGTGATCAACATTTGATCAAGATTGATCAGTTGCGGATCACTCAAGATTGGAACGAAGTGTCAGAATGCTGGAAGAATCGCGGGAATTGGTTGTTTCTTGAGTTGATTGAGGAACACGAGCAGGATTGGCTTCTGCCTGTTTCGGTGAGACAGATTTGGTACGATTTGAGGGCTAAAGAGGCTTTCCAGAAGAGAATTATGGAGTGGACTTGTTTGGTGAGATCAATGTGGGATGATTTGGTGATCGAGGTCATTTCTGAAAACCTGTATCTAACCGCAGAACATGTTCTTAATGTTATTAAGTCTGACAATGGCGTGAATTCGGCGATGCGTAGAAGGATTAATACCAGTAACTCTAAATTATCACTACCTAGTGGGGTTGTTTTGGGAGGCCAAGTAGAGGAAACCCAGCCAACATTGATTTTAGCCGAACCTGATCAAAATTGTAGTCCAAAGCATGAAGCAAACTCGACAAAATCGCAGAGTAAAAGAAGGAAAATCAGTGCTTCAACTGAGGTTGTTTTGGGAGGCCAAGTAGAGGAAACCCAGCCAACATTGATTTTAGCCGATCCTGATCAAAATTGTAGTTCAAAGCACGAAGCAGAATCGACAAAATCGCAGAGTAAAAGAAGGAAAATCAGTGCTTCAACTGAGGTTGTTTTGGGAGGCCAAGTAGAGGAAACCAAGCCAACATTGATTTTAGCTCAACCTGATCAAAATTGTAGTTCAAAGCATGAAGCAGAATCGACAAAATCTTATAGTATAAGAAGGAAAATCGGTGCTTCAACTGAGGTTGTTTTGGGAGGCCAAGTAGAGGAAACCAAGCCAACATTGATTTTAGCTCAACCTGCTCAAAATAGTAGTTCAAAGCATGAACCAGATTCGACAAAATCGCAGAGTAAAAGAAGGAAAATCAGTGCTTCGACTGAGGTTGTTTTGGGAGGCCAAGTTGAGGAAACCCAGCCAACATTGGTTTTAGCTCAACCTGCTCAAAATGGTAGTTCAAAGAATGATGCAGATTCGACAAAATGGCAGAGTAAAAGAAAGAAATTCAATGCTTCAACTGAGGTTGTTTTGGGAGGCCAAGTAGAGGAAACCAAGCCAACATTGATTTTAGCTCAACCTGCTCAAAATGGTAGTTCAAAGAATGATGCAGATTCGACAAAATGGCAGAGTAAAAGAAAGAAATTCAATGTTTCAACTGAGGTTGTTTTGGGAGCCCAAGTAAAGGAAACCATGCCAACATTGATTTTAGCTCAACCTGCTCAAAATGGTAATTCAAAGCATGAACCAGATTCGACAAAATCGCAGAGTAAAATAAGGAAAATCAGTGCTTCAACTGAGGTTGTTTTGGGAGGCAGAGTAGAAGAGTGTACTACTTCACAGCATATATTGCATTATGAGAAGAACCAGCCTAATTTGAATATGGACTGTTGTGCTCTTGTACCAATTATGAATTTGGGCTCATCGGATGATCTTCTGAGGGAGGATGGTGCTTGCTGCACTAATAAATTATTTGATTATTCTTGTGAACTGAAGGATATTTCTTTGGCGAATCTTGAGGAATTATTATCAAATGAACCTCAGACTATATCGGTGTTACCTTCAGAATCGGACTCATTTGCTTGCATCAATGCAGATACTACAAATGACTGTGGGAGCAGATATGATTTAATGTGCAATGAGTCTAGATCTAAGTCTAAATGTTCGGCATTGAAAAGAAAACGAGCTTGGTTACCCGCTGACCCTGACATTCTTCCCGGAGCTGAATATTGCCCTGATGCACTAGTAAATTATTTACGTATTGCAAAAGATGGGAAGTCTCGTCTCAGAGAATCAAGTGTTCGTGGTAGTGCAGCATTGAAAGCTAGGATGCATCTTTCGCATTTGGGTTGGAGGATTGAGTTTAACAATGATACCATCCTTAAAGTCCGTTATATCCCACCTAAAGGGAAGGCTGAGTATTCTCTTTTTAAGGTTTGCCAGGATTTGACGCAAACCACAGGAAAGGTTCAGAATTGCCAGAAAAAATTGGTTGATGTACCTGGCGAGCTGTTGGATTCCAGAGTCCAACCGGTCCATTTGTCAGAAATCCTGGAACAAAACCAAGGGTGTGAGGGTGGTGGATCTACTCCATGTGGAGATGCTTCTCCTCCTTGTGTAGAAACTTTGTCTTTAGACCTTTCTGAAATGCAAGTAGCATCCATGGAGCCTGAATATTGCCCTCAAGCTGTTATAGATCTGCATGAGCTTGGATCAGGGGGAAAGAAGTTGCACGACCATAATGGATTTCTAAAGGAGTTACGTTTAAAAGCAAAGAAGCACCTCTTAGCCATGGGGTGGAGATTATGGAAGACCAAGAAATCAATGCGGTGGAGACTATGGAAGACCAAGAAGCCAGAGATAAGGTACGAATTACGTTACACTTCGCCAAAGGGGAGGTGTTATATATCTCTTCAAACTGCTTGCAAGGGATATATGGAAGAAGAAGGATTTTCTCAGGGTATGGGATCGATGAAAGGCATGATTCCTAGTGAGGAATCCAAGGGCCTATTAATTCCAACCCGTGTGCTGCAATCAACCAAAAGGGCACGGCGGGTCGTGGTACCAAGACGTGCACACTACACCCCTCGAACTGTTTTATCTTGGTTGATAGACAACAATGTGGTGTTGCCGAGGGCAAGGGTACATTACATGGGTAGAAAGGACCATCTTCCAATGGCCGAAGGGAGGATAACTCGTGGTGGGATCAGGTGCAGTTGTTGCACAAAAGTTTTTGGTCTCACTAGCTTTGAAGCTCATGCTGGCAGCAGTTATCTCCGACCAGCCGCCAATATTTTTTTGGAAGACGGCAGGTCTCTGTTAGAGTGCCAGAAGCAAATGGTACAGGATATTAAAGTGAAAAGCTTCGCAGCAGAATCGCCTGACAGAATCAAGGGAAATCAGCCTTGCAACAAGAATGACTACATGTGCTCTGTTTGTCACTATGGGGGTACATTAGTATTGTGTGATCAATGTCCGTCTTCATTTCATTTAAGCTGTCTTGGTTTAGAGGATTTGCCAGAAGGAAAATGGTTCTGCCCATCTTGTCGATGTGCCATATGTGGCCAGAGTGAAATCGATGGAAACGTAGAACAGTTTACAGAGAAGACGGTTCTATGTTGTGATCAGTGCCGGCGTGAATATCACATGGGATGTATAAGGAAAACAGGACTGGTAAAGCTGGAAAGGTGTCCAAAAGGAAATTGGTTTTGCAGTATAAAATGTGAAAAGATATTTGTGGGTCTCCATAAACTTTTGGGAAAATCAATCCCGGCGGGTGTGGATAATTTATCATGGACTATTTTGAAATCCTCGAAAGATGATTATTACAATCTTGATGCATTCGATATTGATACCATGACGGAGCATCACAGCAAGCTCAATGTAGCACTTGGTGTAATGCATGAGTGTTTCAACCCTATTAAAGAACCAAGCACCAAGAGAGATCTTTTCAGTGATGTTCTTTTCAATAAATGGTCAGAGCTGAACCGGCTTAACTATCGGGGATTCTACACTGTGCTTTTGGAGAGGGAGGATGAACTGATCTCGGTGGCTACAGTTAGGGTATATGGTGAAAAGGTGGCAGAAGTACCCCTTGTTGGTACCCGTGTTCAATTTCGACGTCGTGGGATGTGCCGCATTTTAATGAATGTGCTCGAAAAGAAGCTCACAGAATTAGGAGTAGAGAGGCTGCTTTTGCCTGCCGTTCCTCAAGTCGTACATGCGTGGACCACTTCATTTGGATTCTCAAAGATGACAAATTCTGAGAGATTGAAGTTTCTAGAGTACACTTTCCTGGATTTTCAGGACACTACAATGTGTCAGAAAATTTTAAGGATGTCTTCTACAACAAAATTAACTGAAACAAGAGGAAACCAATATAAACTTGGAGATGAGCTCAATCAAAGTGATGAGAATATTGATTTGGATAGATACAGTATTGTTTCTGAAGTAATTCAAACAGAACAAATTGAGCAAAGTGAAATCGTGGAGCAAATACCAGTGGATGTTGCTGCAGGAAATGGCTGTCACTCGATTGAGACTTCTCCTCATGTTGTGGCAAAACAAGTGACTGACCCCAAATCGAACCAGGAAAGCAGTGAAATGGGTATCGACGGAAAGTGCTTGATTAGAAGTTCGGATGAAAGGAAGGAAGATAGGTGTCTTGGTAATGGCTATGGTATTACTGGACAGTGCTCTCTTAAGAGTTTGGTCGGAAGGAAGGCAAGGCTGGAGATATTGGGCGACGAGAACTCGTTGAGCTAG | 4737 | 0.4281 | MVTERPMKRNSEEANRKLFVGEKVEVRSIDEGFGGSWHSATIIACNDSVRHVRYEHLLLDDRSDRLTELIRVSPMIEGVVPEGGTPINYRGMIRPIPPPFKIPQWSLHFGLCVDALVNDAWWEGVIFDHEDGSEERLVLFPDLGDQHLIKIDQLRITQDWNEVSECWKNRGNWLFLELIEEHEQDWLLPVSVRQIWYDLRAKEAFQKRIMEWTCLVRSMWDDLVIEVISENLYLTAEHVLNVIKSDNGVNSAMRRRINTSNSKLSLPSGVVLGGQVEETQPTLILAEPDQNCSPKHEANSTKSQSKRRKISASTEVVLGGQVEETQPTLILADPDQNCSSKHEAESTKSQSKRRKISASTEVVLGGQVEETKPTLILAQPDQNCSSKHEAESTKSYSIRRKIGASTEVVLGGQVEETKPTLILAQPAQNSSSKHEPDSTKSQSKRRKISASTEVVLGGQVEETQPTLVLAQPAQNGSSKNDADSTKWQSKRKKFNASTEVVLGGQVEETKPTLILAQPAQNGSSKNDADSTKWQSKRKKFNVSTEVVLGAQVKETMPTLILAQPAQNGNSKHEPDSTKSQSKIRKISASTEVVLGGRVEECTTSQHILHYEKNQPNLNMDCCALVPIMNLGSSDDLLREDGACCTNKLFDYSCELKDISLANLEELLSNEPQTISVLPSESDSFACINADTTNDCGSRYDLMCNESRSKSKCSALKRKRAWLPADPDILPGAEYCPDALVNYLRIAKDGKSRLRESSVRGSAALKARMHLSHLGWRIEFNNDTILKVRYIPPKGKAEYSLFKVCQDLTQTTGKVQNCQKKLVDVPGELLDSRVQPVHLSEILEQNQGCEGGGSTPCGDASPPCVETLSLDLSEMQVASMEPEYCPQAVIDLHELGSGGKKLHDHNGFLKELRLKAKKHLLAMGWRLWKTKKSMRWRLWKTKKPEIRYELRYTSPKGRCYISLQTACKGYMEEEGFSQGMGSMKGMIPSEESKGLLIPTRVLQSTKRARRVVVPRRAHYTPRTVLSWLIDNNVVLPRARVHYMGRKDHLPMAEGRITRGGIRCSCCTKVFGLTSFEAHAGSSYLRPAANIFLEDGRSLLECQKQMVQDIKVKSFAAESPDRIKGNQPCNKNDYMCSVCHYGGTLVLCDQCPSSFHLSCLGLEDLPEGKWFCPSCRCAICGQSEIDGNVEQFTEKTVLCCDQCRREYHMGCIRKTGLVKLERCPKGNWFCSIKCEKIFVGLHKLLGKSIPAGVDNLSWTILKSSKDDYYNLDAFDIDTMTEHHSKLNVALGVMHECFNPIKEPSTKRDLFSDVLFNKWSELNRLNYRGFYTVLLEREDELISVATVRVYGEKVAEVPLVGTRVQFRRRGMCRILMNVLEKKLTELGVERLLLPAVPQVVHAWTTSFGFSKMTNSERLKFLEYTFLDFQDTTMCQKILRMSSTTKLTETRGNQYKLGDELNQSDENIDLDRYSIVSEVIQTEQIEQSEIVEQIPVDVAAGNGCHSIETSPHVVAKQVTDPKSNQESSEMGIDGKCLIRSSDERKEDRCLGNGYGITGQCSLKSLVGRKARLEILGDENSLS* | 1579 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Eupl01g01047 | 1578 | MobiDBLite | consensus disorder prediction | 293 | 311 | - | - | |
Eupl01g01047 | 1578 | SUPERFAMILY | FYVE/PHD zinc finger | 1124 | 1174 | IPR011011 | - | |
Eupl01g01047 | 1578 | Pfam | PHD-finger | 1133 | 1175 | IPR019787 | - | |
Eupl01g01047 | 1578 | Pfam | Tify domain binding domain | 1053 | 1104 | IPR032308 | - | |
Eupl01g01047 | 1578 | MobiDBLite | consensus disorder prediction | 456 | 483 | - | - | |
Eupl01g01047 | 1578 | MobiDBLite | consensus disorder prediction | 285 | 360 | - | - | |
Eupl01g01047 | 1578 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 1126 | 1175 | IPR013083 | - | |
Eupl01g01047 | 1578 | Gene3D | - | 1298 | 1423 | - | - | |
Eupl01g01047 | 1578 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 1176 | 1235 | IPR013083 | - | |
Eupl01g01047 | 1578 | SUPERFAMILY | Acyl-CoA N-acyltransferases (Nat) | 1325 | 1413 | IPR016181 | - | |
Eupl01g01047 | 1578 | MobiDBLite | consensus disorder prediction | 516 | 536 | - | - | |
Eupl01g01047 | 1578 | MobiDBLite | consensus disorder prediction | 338 | 355 | - | - | |
Eupl01g01047 | 1578 | MobiDBLite | consensus disorder prediction | 562 | 583 | - | - | |
Eupl01g01047 | 1578 | CDD | Tudor_Agenet_AtDUF_rpt1_3 | 18 | 98 | - | - | |
Eupl01g01047 | 1578 | SMART | agenet_At_2 | 103 | 162 | IPR014002 | - | |
Eupl01g01047 | 1578 | SMART | agenet_At_2 | 16 | 80 | IPR014002 | - | |
Eupl01g01047 | 1578 | SUPERFAMILY | FYVE/PHD zinc finger | 1175 | 1230 | IPR011011 | - | |
Eupl01g01047 | 1578 | SMART | PHD_3 | 1133 | 1174 | IPR001965 | - | |
Eupl01g01047 | 1578 | SMART | PHD_3 | 1175 | 1233 | IPR001965 | - | |
Eupl01g01047 | 1578 | MobiDBLite | consensus disorder prediction | 423 | 494 | - | - | |
Eupl01g01047 | 1578 | ProSiteProfiles | Zinc finger PHD-type profile. | 1131 | 1176 | IPR019787 | - | |
Eupl01g01047 | 1578 | ProSiteProfiles | Gcn5-related N-acetyltransferase (GNAT) domain profile. | 1272 | 1424 | IPR000182 | GO:0016747 | |
Eupl01g01047 | 1578 | CDD | NAT_SF | 1330 | 1390 | - | - | |
Eupl01g01047 | 1578 | Pfam | Agenet domain | 21 | 98 | IPR008395 | - | |
Eupl01g01047 | 1578 | PANTHER | PHD FINGER PROTEIN 12 | 879 | 1523 | IPR042163 | GO:0003714|GO:0045892 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Eupl01g01047 | Eupl-Chr1 | 29838558 | 29858714 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Eupl01g01047 | 27 | 241 | PHD Transcription Factor Family | AT5G58610 | 46.759 | 5.84e-59 | 219 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | PHD | Eupl01g01047 | Agenet | 6.5e-14 | CL0049 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Eupl01g01047 | - | - | nnu:104602702 | 780.015 |