Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g01047 ATGGTTACTGAGCGGCCGATGAAACGCAACAGTGAAGAAGCAAACAGAAAGCTTTTTGTTGGAGAGAAAGTCGAGGTGAGGAGTATCGACGAAGGGTTCGGAGGTTCTTGGCATTCTGCAACTATCATTGCCTGCAATGATTCAGTCCGTCACGTTAGGTACGAGCATCTTCTGCTTGATGATCGCTCCGACAGACTCACTGAACTGATCCGAGTTTCTCCTATGATCGAAGGTGTTGTCCCTGAAGGTGGGACCCCCATAAATTACCGTGGCATGATAAGGCCGATACCTCCTCCCTTTAAAATCCCTCAATGGAGTCTCCATTTTGGACTCTGTGTAGACGCTCTTGTAAACGACGCTTGGTGGGAAGGCGTGATCTTCGATCATGAAGATGGTTCAGAGGAGAGGTTGGTTTTGTTCCCGGACTTGGGTGATCAACATTTGATCAAGATTGATCAGTTGCGGATCACTCAAGATTGGAACGAAGTGTCAGAATGCTGGAAGAATCGCGGGAATTGGTTGTTTCTTGAGTTGATTGAGGAACACGAGCAGGATTGGCTTCTGCCTGTTTCGGTGAGACAGATTTGGTACGATTTGAGGGCTAAAGAGGCTTTCCAGAAGAGAATTATGGAGTGGACTTGTTTGGTGAGATCAATGTGGGATGATTTGGTGATCGAGGTCATTTCTGAAAACCTGTATCTAACCGCAGAACATGTTCTTAATGTTATTAAGTCTGACAATGGCGTGAATTCGGCGATGCGTAGAAGGATTAATACCAGTAACTCTAAATTATCACTACCTAGTGGGGTTGTTTTGGGAGGCCAAGTAGAGGAAACCCAGCCAACATTGATTTTAGCCGAACCTGATCAAAATTGTAGTCCAAAGCATGAAGCAAACTCGACAAAATCGCAGAGTAAAAGAAGGAAAATCAGTGCTTCAACTGAGGTTGTTTTGGGAGGCCAAGTAGAGGAAACCCAGCCAACATTGATTTTAGCCGATCCTGATCAAAATTGTAGTTCAAAGCACGAAGCAGAATCGACAAAATCGCAGAGTAAAAGAAGGAAAATCAGTGCTTCAACTGAGGTTGTTTTGGGAGGCCAAGTAGAGGAAACCAAGCCAACATTGATTTTAGCTCAACCTGATCAAAATTGTAGTTCAAAGCATGAAGCAGAATCGACAAAATCTTATAGTATAAGAAGGAAAATCGGTGCTTCAACTGAGGTTGTTTTGGGAGGCCAAGTAGAGGAAACCAAGCCAACATTGATTTTAGCTCAACCTGCTCAAAATAGTAGTTCAAAGCATGAACCAGATTCGACAAAATCGCAGAGTAAAAGAAGGAAAATCAGTGCTTCGACTGAGGTTGTTTTGGGAGGCCAAGTTGAGGAAACCCAGCCAACATTGGTTTTAGCTCAACCTGCTCAAAATGGTAGTTCAAAGAATGATGCAGATTCGACAAAATGGCAGAGTAAAAGAAAGAAATTCAATGCTTCAACTGAGGTTGTTTTGGGAGGCCAAGTAGAGGAAACCAAGCCAACATTGATTTTAGCTCAACCTGCTCAAAATGGTAGTTCAAAGAATGATGCAGATTCGACAAAATGGCAGAGTAAAAGAAAGAAATTCAATGTTTCAACTGAGGTTGTTTTGGGAGCCCAAGTAAAGGAAACCATGCCAACATTGATTTTAGCTCAACCTGCTCAAAATGGTAATTCAAAGCATGAACCAGATTCGACAAAATCGCAGAGTAAAATAAGGAAAATCAGTGCTTCAACTGAGGTTGTTTTGGGAGGCAGAGTAGAAGAGTGTACTACTTCACAGCATATATTGCATTATGAGAAGAACCAGCCTAATTTGAATATGGACTGTTGTGCTCTTGTACCAATTATGAATTTGGGCTCATCGGATGATCTTCTGAGGGAGGATGGTGCTTGCTGCACTAATAAATTATTTGATTATTCTTGTGAACTGAAGGATATTTCTTTGGCGAATCTTGAGGAATTATTATCAAATGAACCTCAGACTATATCGGTGTTACCTTCAGAATCGGACTCATTTGCTTGCATCAATGCAGATACTACAAATGACTGTGGGAGCAGATATGATTTAATGTGCAATGAGTCTAGATCTAAGTCTAAATGTTCGGCATTGAAAAGAAAACGAGCTTGGTTACCCGCTGACCCTGACATTCTTCCCGGAGCTGAATATTGCCCTGATGCACTAGTAAATTATTTACGTATTGCAAAAGATGGGAAGTCTCGTCTCAGAGAATCAAGTGTTCGTGGTAGTGCAGCATTGAAAGCTAGGATGCATCTTTCGCATTTGGGTTGGAGGATTGAGTTTAACAATGATACCATCCTTAAAGTCCGTTATATCCCACCTAAAGGGAAGGCTGAGTATTCTCTTTTTAAGGTTTGCCAGGATTTGACGCAAACCACAGGAAAGGTTCAGAATTGCCAGAAAAAATTGGTTGATGTACCTGGCGAGCTGTTGGATTCCAGAGTCCAACCGGTCCATTTGTCAGAAATCCTGGAACAAAACCAAGGGTGTGAGGGTGGTGGATCTACTCCATGTGGAGATGCTTCTCCTCCTTGTGTAGAAACTTTGTCTTTAGACCTTTCTGAAATGCAAGTAGCATCCATGGAGCCTGAATATTGCCCTCAAGCTGTTATAGATCTGCATGAGCTTGGATCAGGGGGAAAGAAGTTGCACGACCATAATGGATTTCTAAAGGAGTTACGTTTAAAAGCAAAGAAGCACCTCTTAGCCATGGGGTGGAGATTATGGAAGACCAAGAAATCAATGCGGTGGAGACTATGGAAGACCAAGAAGCCAGAGATAAGGTACGAATTACGTTACACTTCGCCAAAGGGGAGGTGTTATATATCTCTTCAAACTGCTTGCAAGGGATATATGGAAGAAGAAGGATTTTCTCAGGGTATGGGATCGATGAAAGGCATGATTCCTAGTGAGGAATCCAAGGGCCTATTAATTCCAACCCGTGTGCTGCAATCAACCAAAAGGGCACGGCGGGTCGTGGTACCAAGACGTGCACACTACACCCCTCGAACTGTTTTATCTTGGTTGATAGACAACAATGTGGTGTTGCCGAGGGCAAGGGTACATTACATGGGTAGAAAGGACCATCTTCCAATGGCCGAAGGGAGGATAACTCGTGGTGGGATCAGGTGCAGTTGTTGCACAAAAGTTTTTGGTCTCACTAGCTTTGAAGCTCATGCTGGCAGCAGTTATCTCCGACCAGCCGCCAATATTTTTTTGGAAGACGGCAGGTCTCTGTTAGAGTGCCAGAAGCAAATGGTACAGGATATTAAAGTGAAAAGCTTCGCAGCAGAATCGCCTGACAGAATCAAGGGAAATCAGCCTTGCAACAAGAATGACTACATGTGCTCTGTTTGTCACTATGGGGGTACATTAGTATTGTGTGATCAATGTCCGTCTTCATTTCATTTAAGCTGTCTTGGTTTAGAGGATTTGCCAGAAGGAAAATGGTTCTGCCCATCTTGTCGATGTGCCATATGTGGCCAGAGTGAAATCGATGGAAACGTAGAACAGTTTACAGAGAAGACGGTTCTATGTTGTGATCAGTGCCGGCGTGAATATCACATGGGATGTATAAGGAAAACAGGACTGGTAAAGCTGGAAAGGTGTCCAAAAGGAAATTGGTTTTGCAGTATAAAATGTGAAAAGATATTTGTGGGTCTCCATAAACTTTTGGGAAAATCAATCCCGGCGGGTGTGGATAATTTATCATGGACTATTTTGAAATCCTCGAAAGATGATTATTACAATCTTGATGCATTCGATATTGATACCATGACGGAGCATCACAGCAAGCTCAATGTAGCACTTGGTGTAATGCATGAGTGTTTCAACCCTATTAAAGAACCAAGCACCAAGAGAGATCTTTTCAGTGATGTTCTTTTCAATAAATGGTCAGAGCTGAACCGGCTTAACTATCGGGGATTCTACACTGTGCTTTTGGAGAGGGAGGATGAACTGATCTCGGTGGCTACAGTTAGGGTATATGGTGAAAAGGTGGCAGAAGTACCCCTTGTTGGTACCCGTGTTCAATTTCGACGTCGTGGGATGTGCCGCATTTTAATGAATGTGCTCGAAAAGAAGCTCACAGAATTAGGAGTAGAGAGGCTGCTTTTGCCTGCCGTTCCTCAAGTCGTACATGCGTGGACCACTTCATTTGGATTCTCAAAGATGACAAATTCTGAGAGATTGAAGTTTCTAGAGTACACTTTCCTGGATTTTCAGGACACTACAATGTGTCAGAAAATTTTAAGGATGTCTTCTACAACAAAATTAACTGAAACAAGAGGAAACCAATATAAACTTGGAGATGAGCTCAATCAAAGTGATGAGAATATTGATTTGGATAGATACAGTATTGTTTCTGAAGTAATTCAAACAGAACAAATTGAGCAAAGTGAAATCGTGGAGCAAATACCAGTGGATGTTGCTGCAGGAAATGGCTGTCACTCGATTGAGACTTCTCCTCATGTTGTGGCAAAACAAGTGACTGACCCCAAATCGAACCAGGAAAGCAGTGAAATGGGTATCGACGGAAAGTGCTTGATTAGAAGTTCGGATGAAAGGAAGGAAGATAGGTGTCTTGGTAATGGCTATGGTATTACTGGACAGTGCTCTCTTAAGAGTTTGGTCGGAAGGAAGGCAAGGCTGGAGATATTGGGCGACGAGAACTCGTTGAGCTAG 4737 0.4281 MVTERPMKRNSEEANRKLFVGEKVEVRSIDEGFGGSWHSATIIACNDSVRHVRYEHLLLDDRSDRLTELIRVSPMIEGVVPEGGTPINYRGMIRPIPPPFKIPQWSLHFGLCVDALVNDAWWEGVIFDHEDGSEERLVLFPDLGDQHLIKIDQLRITQDWNEVSECWKNRGNWLFLELIEEHEQDWLLPVSVRQIWYDLRAKEAFQKRIMEWTCLVRSMWDDLVIEVISENLYLTAEHVLNVIKSDNGVNSAMRRRINTSNSKLSLPSGVVLGGQVEETQPTLILAEPDQNCSPKHEANSTKSQSKRRKISASTEVVLGGQVEETQPTLILADPDQNCSSKHEAESTKSQSKRRKISASTEVVLGGQVEETKPTLILAQPDQNCSSKHEAESTKSYSIRRKIGASTEVVLGGQVEETKPTLILAQPAQNSSSKHEPDSTKSQSKRRKISASTEVVLGGQVEETQPTLVLAQPAQNGSSKNDADSTKWQSKRKKFNASTEVVLGGQVEETKPTLILAQPAQNGSSKNDADSTKWQSKRKKFNVSTEVVLGAQVKETMPTLILAQPAQNGNSKHEPDSTKSQSKIRKISASTEVVLGGRVEECTTSQHILHYEKNQPNLNMDCCALVPIMNLGSSDDLLREDGACCTNKLFDYSCELKDISLANLEELLSNEPQTISVLPSESDSFACINADTTNDCGSRYDLMCNESRSKSKCSALKRKRAWLPADPDILPGAEYCPDALVNYLRIAKDGKSRLRESSVRGSAALKARMHLSHLGWRIEFNNDTILKVRYIPPKGKAEYSLFKVCQDLTQTTGKVQNCQKKLVDVPGELLDSRVQPVHLSEILEQNQGCEGGGSTPCGDASPPCVETLSLDLSEMQVASMEPEYCPQAVIDLHELGSGGKKLHDHNGFLKELRLKAKKHLLAMGWRLWKTKKSMRWRLWKTKKPEIRYELRYTSPKGRCYISLQTACKGYMEEEGFSQGMGSMKGMIPSEESKGLLIPTRVLQSTKRARRVVVPRRAHYTPRTVLSWLIDNNVVLPRARVHYMGRKDHLPMAEGRITRGGIRCSCCTKVFGLTSFEAHAGSSYLRPAANIFLEDGRSLLECQKQMVQDIKVKSFAAESPDRIKGNQPCNKNDYMCSVCHYGGTLVLCDQCPSSFHLSCLGLEDLPEGKWFCPSCRCAICGQSEIDGNVEQFTEKTVLCCDQCRREYHMGCIRKTGLVKLERCPKGNWFCSIKCEKIFVGLHKLLGKSIPAGVDNLSWTILKSSKDDYYNLDAFDIDTMTEHHSKLNVALGVMHECFNPIKEPSTKRDLFSDVLFNKWSELNRLNYRGFYTVLLEREDELISVATVRVYGEKVAEVPLVGTRVQFRRRGMCRILMNVLEKKLTELGVERLLLPAVPQVVHAWTTSFGFSKMTNSERLKFLEYTFLDFQDTTMCQKILRMSSTTKLTETRGNQYKLGDELNQSDENIDLDRYSIVSEVIQTEQIEQSEIVEQIPVDVAAGNGCHSIETSPHVVAKQVTDPKSNQESSEMGIDGKCLIRSSDERKEDRCLGNGYGITGQCSLKSLVGRKARLEILGDENSLS* 1579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g01047 1578 MobiDBLite consensus disorder prediction 293 311 - -
Eupl01g01047 1578 SUPERFAMILY FYVE/PHD zinc finger 1124 1174 IPR011011 -
Eupl01g01047 1578 Pfam PHD-finger 1133 1175 IPR019787 -
Eupl01g01047 1578 Pfam Tify domain binding domain 1053 1104 IPR032308 -
Eupl01g01047 1578 MobiDBLite consensus disorder prediction 456 483 - -
Eupl01g01047 1578 MobiDBLite consensus disorder prediction 285 360 - -
Eupl01g01047 1578 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1126 1175 IPR013083 -
Eupl01g01047 1578 Gene3D - 1298 1423 - -
Eupl01g01047 1578 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1176 1235 IPR013083 -
Eupl01g01047 1578 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 1325 1413 IPR016181 -
Eupl01g01047 1578 MobiDBLite consensus disorder prediction 516 536 - -
Eupl01g01047 1578 MobiDBLite consensus disorder prediction 338 355 - -
Eupl01g01047 1578 MobiDBLite consensus disorder prediction 562 583 - -
Eupl01g01047 1578 CDD Tudor_Agenet_AtDUF_rpt1_3 18 98 - -
Eupl01g01047 1578 SMART agenet_At_2 103 162 IPR014002 -
Eupl01g01047 1578 SMART agenet_At_2 16 80 IPR014002 -
Eupl01g01047 1578 SUPERFAMILY FYVE/PHD zinc finger 1175 1230 IPR011011 -
Eupl01g01047 1578 SMART PHD_3 1133 1174 IPR001965 -
Eupl01g01047 1578 SMART PHD_3 1175 1233 IPR001965 -
Eupl01g01047 1578 MobiDBLite consensus disorder prediction 423 494 - -
Eupl01g01047 1578 ProSiteProfiles Zinc finger PHD-type profile. 1131 1176 IPR019787 -
Eupl01g01047 1578 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 1272 1424 IPR000182 GO:0016747
Eupl01g01047 1578 CDD NAT_SF 1330 1390 - -
Eupl01g01047 1578 Pfam Agenet domain 21 98 IPR008395 -
Eupl01g01047 1578 PANTHER PHD FINGER PROTEIN 12 879 1523 IPR042163 GO:0003714|GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g01047 Eupl-Chr1 29838558 29858714 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g01047 27 241 PHD Transcription Factor Family AT5G58610 46.759 5.84e-59 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Eupl01g01047 Agenet 6.5e-14 CL0049
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g01047 - - nnu:104602702 780.015