Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g01037 ATGTCTTGTGCCGTTGCCGTTTCTGTTGCAGTTGCAAGCTCTCCCGTCTTCTCTCCGTCTGGTAGGGTTTCTTCTGTCTATTGCAAAACGTCTACTTCGTCTCCTGAAACCCTAACCCTAAGTCATCTCCATGGATCCTCCTCGTCGTCTCCTTGTTCTTCTTCTGGCGCTCCGTCCTCGCCGTTCAGGGTACGGCTTCCGAGATCATCGAGTGGGCTTAGGGTTTTTAAGACGGATGTGTGTGGTGGTGGTGTTGAATCGAGTTCTTCTTCTCCTGTGCTTTTAAAGAGGAAGAGACCGGCGAGGATTGATATTCCAGTTGCTGCATTAAGTTTCGATGCTGCAGCGACGGTTGTAGCGGAGGTGGGGTTGAGAGAGGTGGAGGTGGATAGGGAGGGGTATTCTGTTTATTGTAAGAGAGGGAGGAGGGATGCGATGGAGGATCGGTATTCCGCAGTTGTCGATCTTCAAGGCGATCCCAAACAGGCTTTCTTTGGTGTTTTTGATGGGCATGGTGGTGCAAAAGCTGCGGAATTTGCTGCAAAAAACATGGATAAGAACATTATGGATGAAGTGACAAGGAGAGGAGGAGAAGAAATTGAGGAGGCAGTTAAACACGGTTACCTGATTACGGACTCGGAGTTTCTGAAAGAGGATGTCCGTGGTGGCACTTGTTGTGTGTCTGCTTTAATCAGAAAAGGTGATCTTGTGGTCTCCAATGCTGGTGACTGCCGAGCTGTTATGAGCAGAGGAGGGATTGCAGAGGCACTCACTTCTGATCATCGGCCTTCAAGAGAAGATGAAAAAGATAGGATTGAGACCCTGGGGGGCTATGTGGATCGTTGCCATGGTATGTGGAGATTACAAGGGTCTCTAGCTGTATCAAGAGGAATTGGAGATCAACACCTTAAACAATGGGTAATTGCAGAGCCAGAGACTAAAATCGTTGGGATTAAATCGGACTGCGAGTTCTTAATCCTAGCTTCTGATGGGCTATGGGATAAGGTTAGTAATCAGGAGGCAGTAGATATTGCTCGACCTTCATGCTTCTACACCAATAAACCGGAGTCATTATCTGCGTGTAAAAAGCTTGCAGACTTGGCTGTTATGCGAGGCTCTGCTGATGATATAACTGTGATGGTAATCCAGTTGGGAAATTTTATTTGA 1167 0.4747 MSCAVAVSVAVASSPVFSPSGRVSSVYCKTSTSSPETLTLSHLHGSSSSSPCSSSGAPSSPFRVRLPRSSSGLRVFKTDVCGGGVESSSSSPVLLKRKRPARIDIPVAALSFDAAATVVAEVGLREVEVDREGYSVYCKRGRRDAMEDRYSAVVDLQGDPKQAFFGVFDGHGGAKAAEFAAKNMDKNIMDEVTRRGGEEIEEAVKHGYLITDSEFLKEDVRGGTCCVSALIRKGDLVVSNAGDCRAVMSRGGIAEALTSDHRPSREDEKDRIETLGGYVDRCHGMWRLQGSLAVSRGIGDQHLKQWVIAEPETKIVGIKSDCEFLILASDGLWDKVSNQEAVDIARPSCFYTNKPESLSACKKLADLAVMRGSADDITVMVIQLGNFI* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g01037 388 Gene3D - 133 387 IPR036457 -
Eupl01g01037 388 SMART PP2C_SIG_2 144 384 IPR001932 -
Eupl01g01037 388 ProSiteProfiles PPM-type phosphatase domain profile. 133 384 IPR001932 -
Eupl01g01037 388 CDD PP2Cc 133 384 IPR001932 -
Eupl01g01037 388 ProSitePatterns PPM-type phosphatase domain signature. 164 172 IPR000222 GO:0043169
Eupl01g01037 388 SMART PP2C_4 121 382 IPR001932 -
Eupl01g01037 388 MobiDBLite consensus disorder prediction 38 65 - -
Eupl01g01037 388 PANTHER PROTEIN PHOSPHATASE 2C 91 383 IPR015655 GO:0004722|GO:0006470
Eupl01g01037 388 Pfam Protein phosphatase 2C 134 377 IPR001932 -
Eupl01g01037 388 FunFam probable protein phosphatase 2C 25 126 387 - -
Eupl01g01037 388 SUPERFAMILY PP2C-like 133 386 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g01037 Eupl-Chr1 29612140 29614895 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g01037 1 388 PP2C-type Phosphatase Gene Family AT2G30020 62.283 6.11e-156 443
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g01037 K17506 - nnu:104594934 505.753