Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g01028 ATGGAGAATTGGTTTCATCCTGGTTGCCCTGAAGAGGCACATTTGATTCACTACCATGCACTTAACAGAGGGTCGTCTTTTCTTCTTCCATGGCCGTCTCCTGCATCATTCCATGTTCACGGCTTTCCTGCGTCTTCTATGTCTGTCAAAGGGATTTCAGACAATAGAGCTGCGGCCGCTTCCAACAGCCACAGCCAGGCCGAGAAGCGGCGTAGGGAGAGGATCAATGCACATCTTTCCACTCTCAGACGTCTAATTCCTAGGTCTGATAAGATGGACAAGGCTGCTTTGTTAAGCAGTGTGGTTGATCATGTGAAGGATCTAAAGAGAAAAGCTGTTGAGATTGGCCAAGTTTTCACAATCCCCACTGAATTTGATGAAATCACCGTTGAATATGATGAACAAGTAGACCCCACCACTACCACTACCACTACCACTACCAGCACCAGCACCACCAGCACCAACGACAACAACAACAAGAAGAAGAAGGAAAGCCTCTTCATCAAGGCTTCTGTCTGTTGCAATGATCGGCCTGAACTGTACAGCGATCTCATGGGAGCTCTCAAAGGCTTTAAGCTAAGGACTGTTAGAGCAGAAATAGGTAGTTTGGGTGGGAGAGTTAAAAATGTTTTGATCTTTTGCAGTAAAGATAGTGACGAGAGTGTGTGTTTAAACTCTCTCAGGCAATCTCTTAAAGTGGTTTTGAATAGAGCTACAGCTGCTTCATCATCCACGAGTGGCGTTTCAAGCAAGAGGCAAAGGTTGTTGCTGCCATCACATTACTGA 786 0.4593 MENWFHPGCPEEAHLIHYHALNRGSSFLLPWPSPASFHVHGFPASSMSVKGISDNRAAAASNSHSQAEKRRRERINAHLSTLRRLIPRSDKMDKAALLSSVVDHVKDLKRKAVEIGQVFTIPTEFDEITVEYDEQVDPTTTTTTTTTSTSTTSTNDNNNKKKKESLFIKASVCCNDRPELYSDLMGALKGFKLRTVRAEIGSLGGRVKNVLIFCSKDSDESVCLNSLRQSLKVVLNRATAASSSTSGVSSKRQRLLLPSHY* 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g01028 261 MobiDBLite consensus disorder prediction 136 156 - -
Eupl01g01028 261 Gene3D - 53 115 IPR036638 GO:0046983
Eupl01g01028 261 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 59 108 IPR011598 GO:0046983
Eupl01g01028 261 SMART finulus 65 114 IPR011598 GO:0046983
Eupl01g01028 261 CDD ACT_UUR-ACR-like 171 212 - -
Eupl01g01028 261 Pfam Helix-loop-helix DNA-binding domain 62 108 IPR011598 GO:0046983
Eupl01g01028 261 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 63 112 IPR036638 GO:0046983
Eupl01g01028 261 CDD bHLH_AtAIG1_like 54 130 - -
Eupl01g01028 261 MobiDBLite consensus disorder prediction 136 159 - -
Eupl01g01028 261 PANTHER TRANSCRIPTION FACTOR BHLH30 44 258 IPR045847 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g01028 Eupl-Chr1 29465252 29466772 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g01028 41 261 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G40200 41.228 3.04e-43 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Eupl01g01028 HLH 2.3e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g01028 - - nnu:104602558 298.901