LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Eupl01g01018	ATGGAGATCGCTGTGGCCTACCGACCGAACCACCCCGCAGTGCCGCCATGGCTCAACAAGGGAGATAATGCATGGCAGATGACCGCGGCGACACTCGTTGGCCTCCAGAGCATGCCTGGTCTCGTGATCCTCTACGGCAGCATCGTTAAGAAAAAATGGGCAGTTAATTCTGCCTTCATGGCTCTCTACGCCTTCGCGGCTGTCCTCATTTGCTGGGTCCTTGTCTGCTACCGCATGGCCTTTGGTGACAAGCTTCTCCCTTTCTGGGGAAAGGGTGCACCTGCTCTCGGGCAGAATTACCTAACGCACCAAGCTGCTGTGCCGGAGAGTACGCACTATCATGCCGATGGCAAACCGGAGACCTCCATGAACAAACTCTTCTACCCCATGGCCTCCCTCGTCTACTTCCAGTTCACCTTCGCGGCTATCACACTTATCCTAGTCGCTGGGTCGGTCCTCGGCCGCATGAGCATCAAAGCCTGGATGGCCTTTGTACCTCTCTGGCTCATCTTCTCCTACACCGTCGGTGCATTTAGTCTCTGGGGTGGTGGATTTCTCTACCACTGGGGTGTCATTGATTATTCCGGCGGTTACGTCATCCACCTCTCTTCCGGAGTCGCCGGCTTCACTGCTGCCTATTGGGTGGGACCGAGGCTGAAGAGTGATAGGGAGAGGTTCCCTCCGAACAACGTCTTGCTTATGCTAGCTGGAGCCGGGCTCCTGTGGATGGGTTGGTCGGGTTTCAATGGAGGTGCCCCTTACTCGGCCAATATCGACTCTTCGATCGCTGTTCTCAACACGAACATCTGTGCCGCTACAAGTCTTCTCGTATGGACTTCTCTTGACGTGATCTTCTTTGGGAGACCTTCGGTGATCGGAGCCGTTCAAGGGATGATGACCGGCCTTGTTTGCATTACTCCGGGAGCAGGGGTGGTGCAATCGTGGGCGGCGATAGTGATGGGTATCCTTTCCGGCAGCATCCCATGGTTCACCATGATGATCCTCCACAAGAAGTCTACACTACTACAGCAGGTGGATGACACACTGGGTGTGTTTCATACACACGCGGTTGCGGGGCTGTTGGGTGGCGCCCTTACCGGGCTTTTGGCTGAGCCGGCCCTTTGTAGGCTGGTCTTACCTGTGAGGGACTCGAGGGGTGCATTTTATGGTGGTGGTGGTGGGGTGCAGTTCTTGAAGCAATTAGTTGCAGCCCTATTCGTGATCGGTTGGAATGTAGTGTCAACAACGGTTATTCTTCTTGCTATAAGGTTGTTCATACCCCTAAGGATGCCAGAAGAACAGCTTTTGATTGGAGATGATGCCGTGCATGGTGAAGAAGCTTATGCCCTCTGGGGCGACGGAGAGAAGTATGATGTCACGACACACGGTCGCCATATACCGTCGTACTCCGGCGAAACAGCACCGTCCCAGTATGTCAATGGTGCAAGAGGTGTAACCATTCAATTGTAA	1470	0.5435	MEIAVAYRPNHPAVPPWLNKGDNAWQMTAATLVGLQSMPGLVILYGSIVKKKWAVNSAFMALYAFAAVLICWVLVCYRMAFGDKLLPFWGKGAPALGQNYLTHQAAVPESTHYHADGKPETSMNKLFYPMASLVYFQFTFAAITLILVAGSVLGRMSIKAWMAFVPLWLIFSYTVGAFSLWGGGFLYHWGVIDYSGGYVIHLSSGVAGFTAAYWVGPRLKSDRERFPPNNVLLMLAGAGLLWMGWSGFNGGAPYSANIDSSIAVLNTNICAATSLLVWTSLDVIFFGRPSVIGAVQGMMTGLVCITPGAGVVQSWAAIVMGILSGSIPWFTMMILHKKSTLLQQVDDTLGVFHTHAVAGLLGGALTGLLAEPALCRLVLPVRDSRGAFYGGGGGVQFLKQLVAALFVIGWNVVSTTVILLAIRLFIPLRMPEEQLLIGDDAVHGEEAYALWGDGEKYDVTTHGRHIPSYSGETAPSQYVNGARGVTIQL*	490

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Eupl01g01018	489	Pfam	Ammonium Transporter Family	24	448	IPR024041	GO:0008519\|GO:0016020\|GO:0072488
	Eupl01g01018	489	PANTHER	AMMONIUM TRANSPORTER MEP2	11	458	IPR001905	GO:0008519\|GO:0016020\|GO:0072488
	Eupl01g01018	489	FunFam	Ammonium transporter	6	451	-	-
	Eupl01g01018	489	SUPERFAMILY	Ammonium transporter	17	430	-	-
	Eupl01g01018	489	Gene3D	Ammonium transporter AmtB like domains	4	451	IPR029020	-
	Eupl01g01018	489	ProSitePatterns	Ammonium transporters signature.	193	218	IPR018047	GO:0008519\|GO:0016020\|GO:0072488
	Eupl01g01018	489	PRINTS	Rhesus blood group protein signature	318	336	IPR002229	GO:0005886
	Eupl01g01018	489	PRINTS	Rhesus blood group protein signature	232	250	IPR002229	GO:0005886
	Eupl01g01018	489	PRINTS	Rhesus blood group protein signature	263	285	IPR002229	GO:0005886
	Eupl01g01018	489	PRINTS	Rhesus blood group protein signature	137	153	IPR002229	GO:0005886
	Eupl01g01018	489	NCBIfam	ammonium transporter	22	448	IPR001905	GO:0008519\|GO:0016020\|GO:0072488

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Eupl01g01018	Eupl-Chr1	29361536	29363759	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Eupl01g01018	130	489	Inorganic Solute Cotransporters	AT2G38290	77.778	0.0	547

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Eupl01g01018	K03320		-	mof:131167637	837.795