Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g01017 ATGGAGACCCTTCTTGAAGTAAAAGAAGCAGTCCTCATCACCCCTTCAGACCCAACACCTTCTCATGTTCTCACCCTCTCCCCTCTCGACTCTCAACTCTTCCTCCGCTTCACCATCGAGTACCTCCTCGTCTATCCATCTCCATCACCCGGCTCTGATCGTAACGCAACCGCCGCTCGGATCAAGGCCGCACTCTCCCAAGCCCTCGTCCCATACTACCCACTCGCTGGCCGGGTCAGAGCTAGATCCGACGGTTCCAATCTAGAGGTCGTCTGTAGAGCCCAAGGCGCTGTTTTTATCGAAGCCATGTGTCATATATCCATCGCCGAGTTCGAGCTGGCTCCACGTTACTCTACACAGTGGAGGAAACTCTTATCTCTATATGTGGCTGATGTTCTTCAAGGGGCCCCACCACTCGTCGTCCAGCTTACGTGGCTCGCTGAGGGCGCAGCGGCTGTTGGAGTTGGTATCAGCCATTGTATCTGTGACGGAATCGGTAGCGGTGAGTTCCTTAACTCGTTCTCCGAGTTAGCAACTGGGCGACGTGGACTCGATGATTTCAAACCTAGACCCGTCTGGAACCGTCATCTTCTCGACCCAATAACAATGGGACCACCTCACAACATCTCTATCGCACACCCAGAGTTCAATCAAGTCCCGGACCTTTGTGGGTTTGTATCCCGATTCGCGAGAGAACCGCTCGCTCCAACATCCATCGTCTTTGATCGGCAATCACTAACAGAGCTCAAGAAGCTTGCCTCGCCCACGAGTCGACCTAACGAGTACTCGTACACGTCGTTCGAGGTGCTCTCGGCACACGTGTGGAGATGCTGGGCTAGAGCGTTAGAGTTGCCTTCAGCACAGACGTTGCGAATGCTCTTCAGCGTCAATGTCCGAGACCGAGTCAAACCGGGCCTACCCGACGGGTTCTACGGAAACGGGTTCGTGCTGGGGTGCGCGCAGACGAGCGTTAAGGGGCTAGCAGATAAAGGGTTGGGTTGGGCTGCCAGGCTGGTGAAGAGAGCGAAGGAAAGAGTAGGAGACGAGTATGTGAGATCGGTTGTTGAAGCGGTGAGCGACTCTAGAGCGTGTCCTGACTCGGTGGGGGTTCTGATCGTATCGCAGTGGTCAAGGATGGGGTTGGAGAATGTTGACTTTGGGATGGGGAGGCCGGTTCATGTGGGACCCATTTGTAGTGATCGGTATTGTTTGTTTTTGCCGGTGTACGAACAGAGTGATGCAGTGAAGGTAATGGTGGCGGTCCCAAAGAGCGCCGTTGGCAAGTACGAATATTTGCTCAGGAGCCCCTGCTCTTGA 1317 0.5452 METLLEVKEAVLITPSDPTPSHVLTLSPLDSQLFLRFTIEYLLVYPSPSPGSDRNATAARIKAALSQALVPYYPLAGRVRARSDGSNLEVVCRAQGAVFIEAMCHISIAEFELAPRYSTQWRKLLSLYVADVLQGAPPLVVQLTWLAEGAAAVGVGISHCICDGIGSGEFLNSFSELATGRRGLDDFKPRPVWNRHLLDPITMGPPHNISIAHPEFNQVPDLCGFVSRFAREPLAPTSIVFDRQSLTELKKLASPTSRPNEYSYTSFEVLSAHVWRCWARALELPSAQTLRMLFSVNVRDRVKPGLPDGFYGNGFVLGCAQTSVKGLADKGLGWAARLVKRAKERVGDEYVRSVVEAVSDSRACPDSVGVLIVSQWSRMGLENVDFGMGRPVHVGPICSDRYCLFLPVYEQSDAVKVMVAVPKSAVGKYEYLLRSPCS* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g01017 438 Pfam Transferase family 5 428 - -
Eupl01g01017 438 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 13 423 - -
Eupl01g01017 438 Gene3D - 227 432 IPR023213 -
Eupl01g01017 438 Gene3D - 2 218 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g01017 Eupl-Chr1 29350646 29352267 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g01017 5 433 Monolignol Biosynthesis Gene Families AT5G48930 28.412 3.25e-43 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g01017 - - ming:122090059 665.611