Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g01013 ATGAAGGAATCTATGGAAGACCAAGGTGCGCAGACCACCAACCGGGCCCACCAACACCACCACCCTTACAACGGCGGCGGTGGCGGCCGCGAGGACTGCTGGAGCGAAGGCGCAACTGCAACCCTAATCGAAGCTTGGGGCGACCGTTATCTCCAGCTCAGCCGTGGAAACCTCCGTCAGAAAGATTGGAAGGAAGTTGCCGATTCTGTTAACGGGCGTCAGGACGGCCTAAAAGCCCGCAAGACCGACATCCAATGCAAGAACCGGATCGACACCCTCAAGAAGAAATACAAGCTCGAGAAATCAAAACCCGCTCCGTCAAAATGGCCGTTTTATTCCCGTCTGGATCAGCTCATCGGAACCACGACTCCTGGCGCAAACAAGAAAATCACTCCCCCGCCGTCTCTTCATAAGTCATCCGCCGTTACTTTCATCGTTAAGTCTGGCAAGGAGAAGCTAAGCCATAACCCTAATCATAACGCCGTTGTGTATTCCGGTGGCTCTTCGTCCAAGTCCAGGATGAACTCTCCCAGGTCCACCGAGAGCTCCAATGGCGATGACGATGGTGATGGTGATGGTGATGGCGATGATGATGGTGGGAACAATGATATGGAATTTGATGGTAGTGTGAGGAAGCGTCGGATGGATCTGGATTCGTCTGATGGGGCAGCGTTTAGGGAGCTAGCGAGAGCGATTCTTAAGTTCGGAGAGGTTTACGAGAAAATTGAGAGTTCGAAGCAACAGCAGATGATGGAGCTTGAGAGGCAGAGGATGGAGTTCACCAAGGATCTTGAGTTTCAGAGGATGCAGATGTTCATGGAAGCTCAGCTTGAGCTTGAGAAGATGAAGCGTCCGAAGTATGCGTCCGTTGCTGGGAAGAAGTTATAG 888 0.5225 MKESMEDQGAQTTNRAHQHHHPYNGGGGGREDCWSEGATATLIEAWGDRYLQLSRGNLRQKDWKEVADSVNGRQDGLKARKTDIQCKNRIDTLKKKYKLEKSKPAPSKWPFYSRLDQLIGTTTPGANKKITPPPSLHKSSAVTFIVKSGKEKLSHNPNHNAVVYSGGSSSKSRMNSPRSTESSNGDDDGDGDGDGDDDGGNNDMEFDGSVRKRRMDLDSSDGAAFRELARAILKFGEVYEKIESSKQQQMMELERQRMEFTKDLEFQRMQMFMEAQLELEKMKRPKYASVAGKKL* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g01013 295 MobiDBLite consensus disorder prediction 204 218 - -
Eupl01g01013 295 MobiDBLite consensus disorder prediction 150 218 - -
Eupl01g01013 295 Gene3D - 34 99 - -
Eupl01g01013 295 FunFam trihelix transcription factor ASIL2 34 99 - -
Eupl01g01013 295 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 18 284 IPR044823 -
Eupl01g01013 295 MobiDBLite consensus disorder prediction 186 203 - -
Eupl01g01013 295 MobiDBLite consensus disorder prediction 1 34 - -
Eupl01g01013 295 Coils Coil 239 270 - -
Eupl01g01013 295 MobiDBLite consensus disorder prediction 158 182 - -
Eupl01g01013 295 Pfam Myb/SANT-like DNA-binding domain 31 118 IPR044822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g01013 Eupl-Chr1 29321437 29326250 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g01013 186 284 Trihelix Transcription Factor Family AT3G14180 41.346 2.44e-17 80.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Eupl01g01013 Myb_DNA-bind_4 6.6e-26 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g01013 - - nnu:104597314 404.445