Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g01012 ATGTCATACGTGAGCAGGAAGGTGAACATGGGGCTGCCGCCGAAGCATGGAAAGGCTCCGGCTGGGACTCTGATCACAGATCGAAAGAGCGAAAACCCATCTCCTTGGCTTGACGTGGAGGGGTCCACGTTAGGGTTTACTGATCATCACAGCGGTCCATCACAAAGTCGATCAGTCAGTGATTCCCTAGCATGTATGAAAAGCCCCGATAGCTTGAGAATACTGACAACCACCATCGGCAATGACGGTTCTGGAAGCAGTAACGTAGATCCGATGCCGTTTGAATGTAATGTTACTTCTGTTCCAGTACTGGTCGATAAGATCAAGACAATGGAGAATCCATTGCTACCGTCTGATGAGAAACCAAACTCAGATGATGAAGTAGCAGCTATCATGGCTACTTGGGATACTACTACTGTCAAAACTGAGTCAGATGTCAATAACCAGTACAAGTGGATGAGCCAGAAACTCGACCCTAAAATGGATCCCAGAAAGATCAAACGAGTCATGGCGAACCGACTATCTGCGCAGAAGTCTCGGCTTAAAAAGCTAGAATACATCTCTGAACTCGAAAGAAGAGTGAATTCTTTACAGATAGAAGTGAATTTGATCTCTGCTCAAGTTTCTCATTACAAAGGCCAAGGCCTGATACTTAGAATGGAGAACAATAACATGAAGCAAAGAATAGCATGTCTCATGGATGACAAAGTTTTCAAAGATGCACAAACCCGAGCGCTGAGAGAAGAACGAGAGAGGTTGATGCAACTCTTCATGCTTCAACAACAGCTCCAACAACAACAAGTGATGAACGGGTTCGAGCTGAATCAACCACCGAACTTCGGCATAAACGGAATCAATAATCTAGATTTAAACTACATTATGTGA 885 0.4452 MSYVSRKVNMGLPPKHGKAPAGTLITDRKSENPSPWLDVEGSTLGFTDHHSGPSQSRSVSDSLACMKSPDSLRILTTTIGNDGSGSSNVDPMPFECNVTSVPVLVDKIKTMENPLLPSDEKPNSDDEVAAIMATWDTTTVKTESDVNNQYKWMSQKLDPKMDPRKIKRVMANRLSAQKSRLKKLEYISELERRVNSLQIEVNLISAQVSHYKGQGLILRMENNNMKQRIACLMDDKVFKDAQTRALREERERLMQLFMLQQQLQQQQVMNGFELNQPPNFGINGINNLDLNYIM* 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g01012 294 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 167 182 IPR004827 GO:0003700|GO:0006355
Eupl01g01012 294 MobiDBLite consensus disorder prediction 47 61 - -
Eupl01g01012 294 SMART brlzneu 160 224 IPR004827 GO:0003700|GO:0006355
Eupl01g01012 294 Coils Coil 246 266 - -
Eupl01g01012 294 Pfam bZIP transcription factor 164 212 IPR004827 GO:0003700|GO:0006355
Eupl01g01012 294 MobiDBLite consensus disorder prediction 1 61 - -
Eupl01g01012 294 SUPERFAMILY Leucine zipper domain 164 218 IPR046347 GO:0003700|GO:0006355
Eupl01g01012 294 PANTHER BASIC LEUCINE ZIPPER 34 10 275 - -
Eupl01g01012 294 Coils Coil 187 207 - -
Eupl01g01012 294 CDD bZIP_plant_RF2 165 212 IPR044759 GO:0003700|GO:0006355
Eupl01g01012 294 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 162 225 IPR004827 GO:0003700|GO:0006355
Eupl01g01012 294 Gene3D - 163 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g01012 Eupl-Chr1 29315191 29316601 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g01012 162 241 bZIP Transcription Factor Family AT3G58120 55.000 4.03e-24 97.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Eupl01g01012 bZIP_1 3.1e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g01012 - - tcc:18612967 134.035