Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g01010 ATGGAGGAGAGTGGTAGTACTGAAGGTTCCAAGACTAACCCTTGTAGCAAAAATGAGGATGAGGACGAGGATGGCAAGCCTAGAAATGGAAGCAGTTCAAGCAATAGCACAGTTGAGGAAAACGAGAGGAAGACAAGCTCCAGTGGGGTACGACAGTATGTACGCTCCAAGATGTCGAGGCTTCGTTGGACGCCTGATCTCCATCTTTGTTTTGTTCACGCTGTTGAAAGACTAGGTGGACATGATAGAGCAACACCTAAGCTGGTTCTTCAATTGATGAACATCAAAGGCCTTAGCATCGCTCATGTCAAGAGCCATCTACAAATGTATAGGAGCAAGAAGATTGACGATCCAGGACAAGTTATAACCGAGCAAGGGCATCTCATGGAAGGTGGAGATCGTCATATTTTCAACCTTAGCCAACTCCCCATTTTACAAGGTTTCAATCAAACACCTACTTGCAGTTTCAGTAGTCATGGAAACTGGCCGTGGATGACCAGTGCTGGGGCTGCGAACAATAGGGCAAGGTCTGGATTTTATGGTTCAGTAATGGAGAGTATCTTTTGTGGCAACACACCGAATTGGAATTTCCACATGGGTAATTCTACTTCTAATGAACAAATTACAAAGAGAAAATGTGAACCTCATGATAAATTTCGATTGTTGCATGATCTTGAATCCTGGAGAACCCAAATCCGACCTTTCCCAATGGATCCAAACTTCATAACCCAATTGCAAGAAAGGGGAAAAGAAGAGCGTAACATGGTGAAAAGAAAGGCGTCTGATTGTAACCTCGATTTGAATCTATCTCTGAAGATAACATCAAGACATGAAGAGTGCCAGAAAGGTTTGGAGGATGATGGAGTTGACAGTGATTTATCTCTTTCTTTGTTCTCACCTTCATCCTCAAAGCTTAGCAGGTTGAAGGAAGGTGATGGAAGTAGGGATCATGCAAGAATGGCAAGTACTCTAGATCTGACTATATGA 987 0.4316 MEESGSTEGSKTNPCSKNEDEDEDGKPRNGSSSSNSTVEENERKTSSSGVRQYVRSKMSRLRWTPDLHLCFVHAVERLGGHDRATPKLVLQLMNIKGLSIAHVKSHLQMYRSKKIDDPGQVITEQGHLMEGGDRHIFNLSQLPILQGFNQTPTCSFSSHGNWPWMTSAGAANNRARSGFYGSVMESIFCGNTPNWNFHMGNSTSNEQITKRKCEPHDKFRLLHDLESWRTQIRPFPMDPNFITQLQERGKEERNMVKRKASDCNLDLNLSLKITSRHEECQKGLEDDGVDSDLSLSLFSPSSSKLSRLKEGDGSRDHARMASTLDLTI* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g01010 328 Gene3D - 58 115 - -
Eupl01g01010 328 MobiDBLite consensus disorder prediction 1 52 - -
Eupl01g01010 328 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 55 115 IPR017930 -
Eupl01g01010 328 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 38 210 IPR046955 GO:0003700
Eupl01g01010 328 MobiDBLite consensus disorder prediction 29 52 - -
Eupl01g01010 328 Pfam Myb-like DNA-binding domain 61 111 IPR001005 -
Eupl01g01010 328 SUPERFAMILY Homeodomain-like 58 113 IPR009057 -
Eupl01g01010 328 NCBIfam myb-like DNA-binding domain, SHAQKYF class 59 114 IPR006447 GO:0003677
Eupl01g01010 328 MobiDBLite consensus disorder prediction 14 28 - -
Eupl01g01010 328 FunFam Myb family transcription factor 57 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g01010 Eupl-Chr1 29299496 29301219 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g01010 47 143 G2-like Transcription Factor Family AT2G42660 57.143 1.19e-33 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Eupl01g01010 Myb_DNA-binding 4.1e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g01010 - - nnu:104597309 341.273