Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g01009 ATGAAGGAAAGTGATAGTAGTGATGGTTTGAAGATGGAAACCTCTCAGAACAACGAGGACGATGAGGAAGTAGATGATGGCAAGCCCAAGAACGGTGCAAGTTCAAGCAACAGCACAATCGAGGACAGTGAGAGGAAGATGAGCTCGACTGGGGTACGACAGTATGTTCGGTCCAAGATGCCGAGGCTTCGTTGGACGCCTGATCTCCATCTTTGTTTCGTTCATGCCGTGGAAAGACTTGGGGGTCAAGAAAAAGCAACACCTAAGTTAGTTCTTCAGTTGATGAACATCAAGGGCCTTACCATCGCTCATGTCAAGAGCCATTTACAGATGTATAGGAGCAGGAAGATAGACGACCAGGGTCAAGTTATAAACGAAAAGGGGCATCTTATGCAAACTGGGGATCCCCATATCTACAATCCAAGCAGCCATCTACCCATGTTACAAGGTTTTAATCAAAGGCTTACGTCTAGTTTCAGTGATGCTTCTTGGAGTAGTCATGGGAACTGGATGCCTAGTCCTTACATGAGTGTGGACATGAACGTTAGAGCGAGATCCGGGTTTTATTCTTCGGTGGGTGAGAGGATCTTTGGAGCCAATGACGCTAATCGGGATTTCTCTATGGATAATTCTACTATCAGTGAACAAAGTAGTAGGAGAATCCATAAACCCCAGGAAGAATTTCATCTGGTTTACCATCGTGAATCATGTCAAACCCCAATCAGACCAAGCTCAATGGAACCCAACTTCATAACCCAATTACAAGCAAGAGCAAGGGAGGAAGTGAGTTGTTTGAACAACACAGAAAAAAAATGGAGGGCGGACGGAGAAGAGAGAAACATGGTAAAAAGGAAGGCCACCGATTGTGACCTCGATTTGAATCTGTCGCTGAATGTGAAATCATCGGGACAAGGGGACGGATGGAGAAGTGGTTGGGAGGAGGAAGAAGTAGATGGTAATCTATCTCTTTCTTTGTTCTCTCCTTCAAAGAAGGAAAGATATTCTATAGATCTAAACCAAGGTTTAAAGCTTAGCAGGTTGAAGGAAGAAGATAGTAGGAAGAATTCAACAGTGGCGGCCAGTACTCTAGATCTGATTATATGA 1104 0.4438 MKESDSSDGLKMETSQNNEDDEEVDDGKPKNGASSSNSTIEDSERKMSSTGVRQYVRSKMPRLRWTPDLHLCFVHAVERLGGQEKATPKLVLQLMNIKGLTIAHVKSHLQMYRSRKIDDQGQVINEKGHLMQTGDPHIYNPSSHLPMLQGFNQRLTSSFSDASWSSHGNWMPSPYMSVDMNVRARSGFYSSVGERIFGANDANRDFSMDNSTISEQSSRRIHKPQEEFHLVYHRESCQTPIRPSSMEPNFITQLQARAREEVSCLNNTEKKWRADGEERNMVKRKATDCDLDLNLSLNVKSSGQGDGWRSGWEEEEVDGNLSLSLFSPSKKERYSIDLNQGLKLSRLKEEDSRKNSTVAASTLDLII* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g01009 367 MobiDBLite consensus disorder prediction 1 52 - -
Eupl01g01009 367 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 57 117 IPR017930 -
Eupl01g01009 367 Pfam Myb-like DNA-binding domain 63 113 IPR001005 -
Eupl01g01009 367 MobiDBLite consensus disorder prediction 30 52 - -
Eupl01g01009 367 NCBIfam myb-like DNA-binding domain, SHAQKYF class 61 116 IPR006447 GO:0003677
Eupl01g01009 367 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 40 203 IPR046955 GO:0003700
Eupl01g01009 367 FunFam Myb family transcription factor 59 117 - -
Eupl01g01009 367 MobiDBLite consensus disorder prediction 1 29 - -
Eupl01g01009 367 SUPERFAMILY Homeodomain-like 59 115 IPR009057 -
Eupl01g01009 367 Gene3D - 60 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g01009 Eupl-Chr1 29289608 29291423 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g01009 49 118 G2-like Transcription Factor Family AT2G42660 74.286 1.02e-32 121
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Eupl01g01009 Myb_DNA-binding 3.1e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g01009 - - msin:131253396 340.887