Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g01004 ATGATGCAGCCTCAGCTTCATGATGATCAGCTTCTTCAGCCCTCCTGGCCATATTACAACATCATAGACTCATCTTTTGATCATGAAGCTTGTCTGCTGGATGGTCTAGACATGGAGTTCTCTTCTTCATTCACCACCACTGAGGACTCCGACGACATATCTTCGATCCCGTTTTTCGCTACTATGTGCCTTGATGATGAGTTATTCACTTTGCCTGTTAATGGTGATGATCATGATGTGCCAGTCATGTTTCCTTATGTAGAACAATTTTCACCAAATTTTGAGGAGTTGGGTCCTTTTTCATCAAATCACCAATTATTGAGTGATGAGATTGAGGATGTGTCTGCATGGATGGAGGAGAGTGAGAATGGTTTTTCTTCACCACAACACTTAATTGAAGAAGAATATGAAGGGAGCCTAAGCTCGTCGATGATATCTAGCGAGATATCTGCGATAACATCGGTTCAAACATCGCTAGTCTTGCCTAGGGAAGACATGGAAGTCGATAACCAATTGAGCATTTCTCATTTACTCAAGGCATATGGTGAGGCCATGGAGAATGAACAGGTAGAGCTGGTGGAGGTGATCATGAGGCGTATAAGGGAGAAGGTTAGTCCAATGGGGAAAACCGTGGAGCGCCTTGCGTATTACTTATTCCAGGCCTTGGACAAGCAAGGCGACTACCTAAAACAAGAATCGAACAAGAACTACGAGGCGGCATTCAGAGCCTTCTACCAAATATTCCCATACGGAAGGTTCGCTCACCTCACTGCAAATTTGGCAATCCTCGAAGCGATGCCTAAGGACGTCGAGACGATACATATCATTGACTTTGACATGGGTGAAGGTGTTCAATGGCCTCCAATTATTGAGGCCATCGGACGACGACAAGCAGTAAGACTAACATCGGTAAAATGGACGAAGAAGGAAGAGGATTGCGATCGCGTATGGAGGTTCGAGGAGACAAAGAGGCGACTCGACGATCACGCGCAATCTTTTGGTCTAAATTTGAAGGTGGAGGAGATGGACATGGAGGAGCTAGTGAGTGAGATAATGAAGATGAAGAAAATGAGTAGGAGAAGAGAATGGTTGGCCTTCAATTGCATGGTTGGTCTCCCACACATGGGGAGAGGGAGGAGTAAAAGACATGTAGCAGAATTTCTTAGGCTAGCTAAGGAGTTGATCACCAACACTAATACTAGTAATAGTAATAGTGGTATTATAACTTTTGGGGATGGAGATGGTGTTGAGGAGGGAATGAGAAATTGTTGTGGATTTGGGTCTTTCTTTGATGGGTATGTACTACACTTCAATGCTCTGTTTGAATCAATGGAGTGGTATTTTCCTGCTCACCTAACAGAAGCAAGAACAGCAATGGAGTGCCTCTTTGTGGCCCCTTCTGTTTCTTCTCTTGCTTGCTTTCACAAGTGGGAGGAGACTAGGGAAGGTTGTGATCTTCAGTTGGGATATGGGTTGGAAGGTTGGAGATTTAGCAGAGAGAACTTGATGCAGGCTAAAGAAATGGTCTATGACTTGAGCACAAGGTTGCCCAAATGCAGTATGAGCCATAGAAGCTCGTTGAACCGACCAAGCACAACTGGGCAGTTATACCTGGCACACCAAACTCTCGGGGTGGTAAAATGCTCAGTCTGTTCCCCGAAGAACATTCCCATGTTCGCCGTTTTTTTTATGACCAATCGACGCGTTATCACTTACCATGGTAGAACGTTCCGTACAAGAAACGTAAGACCTAAAAGAGAGCCTTGTTGTGCGGGACTGAACTGGGCCGACAACAAAGCCATGATTCAGTGGGCCCACATTGAGGCTGTATATCTTTTACCGTGTTCCGTTGATGGGTTGTTGGACCCACTTAATCCAGCTGTTTCACGTCTGGGCCCAGTCTGGGTCCTTCGGGACGCACATGCTTTGGCCCGGGCTCGATTTATGAAATTCTTTCGGATGCTAAGACTGGTTCTTATCACCCAATCACTATGGCTATTGGAACTAATACGTGGGACCCTCATCAGTATCAATGAGGGTGACCTGAAATTGTCATATTTGAGTAGACCATCCTTATGGTCTATCAAACAGGTGACTGCGTACCGAATCCGGCACACTGAAACACGTCGGAAAACTCAAAAAGATATCGTTTATGCTCCAGAGAAGATAGTTTGTTCACTCAGAATGGACGAGCGTTGGCGATTCAATCGGTTCAGTCCACGATTAGCTTTGTTGCTAGTTCTTTGTTTGTTATATCAGAATTTGGATTTTTGTTGCTCCTTAAACGTTGAAGGGTTGGCACTGTTGAGATTTCGGCAGAGAGTGGTGAGAGATCCGTACGGAGCTTTGTCGAATTGGAACTGTAATGATAGAGAGAATGATCCGTGTTCGTGGTTCGGTGTCGAGTGCTCTGACGGAAAAGTTGTGAGTTTGAACTTGAAAGATCTTTGTCTTGGAGGAATACTGGCTCCTGAACTTGGGAACCTCATTCACATTAAGTCTATTATTTTACGCAATAATTCTTTTTCTGGAATCATCCCTAAAGAGATCGAAGAACTGAATGAGCTAGAGGTGTTGGACTTGGGATACAATAACTTCAGTGGGCCACTTCCTTATGATCTTGGCAATAATCTGTCCTTGGCAATCCTTCTACTTGACAACAACAGGTTCCTGGGTTGCATATCTCCTGAACTTCGTGAGCGTACTATGCTTTCTGAACTTCAGGTAGATGAGAACCAGCTATCCAATGTTGCAGAACGGGCATCATGGGATATTGGCCAAGCTGGAGATGCAACTTTCCGGAGGCTGCTGCAGAATAATTTAAAAGCACAAGAATCATCACCAGCACCATCACCAGCACCGTCTAATTCGCCATCATCTTCCCCATCTCCATCATCTTCACCGTCTATTTCACCATCATCTTCCCCATCCCCATCACCATCTCCCACAGACCCTCCCATTGCACCACCTCGCCATTCTGCTCCTAAACCTTCGCCCTCAGCAAACCCCCCCTCACAGTTCAAAAGAACAAGTTCCCAATCAAAACATCTATGGCTAATTATATCTGGATGCATAGGGGCTTCTTTTCTTGTTGTCATTTTTGCCCTCATCTGTCGAAAGAATAAGGTGGTCACTGTCAAACCGTGGGCCACAGGGTTAAGTGGGCAACTGCAGAAAGCATTTATTACAGGTTATTCATTGGAACATATCATTTTGCATATATATAGATTCTGA 3234 0.4487 MMQPQLHDDQLLQPSWPYYNIIDSSFDHEACLLDGLDMEFSSSFTTTEDSDDISSIPFFATMCLDDELFTLPVNGDDHDVPVMFPYVEQFSPNFEELGPFSSNHQLLSDEIEDVSAWMEESENGFSSPQHLIEEEYEGSLSSSMISSEISAITSVQTSLVLPREDMEVDNQLSISHLLKAYGEAMENEQVELVEVIMRRIREKVSPMGKTVERLAYYLFQALDKQGDYLKQESNKNYEAAFRAFYQIFPYGRFAHLTANLAILEAMPKDVETIHIIDFDMGEGVQWPPIIEAIGRRQAVRLTSVKWTKKEEDCDRVWRFEETKRRLDDHAQSFGLNLKVEEMDMEELVSEIMKMKKMSRRREWLAFNCMVGLPHMGRGRSKRHVAEFLRLAKELITNTNTSNSNSGIITFGDGDGVEEGMRNCCGFGSFFDGYVLHFNALFESMEWYFPAHLTEARTAMECLFVAPSVSSLACFHKWEETREGCDLQLGYGLEGWRFSRENLMQAKEMVYDLSTRLPKCSMSHRSSLNRPSTTGQLYLAHQTLGVVKCSVCSPKNIPMFAVFFMTNRRVITYHGRTFRTRNVRPKREPCCAGLNWADNKAMIQWAHIEAVYLLPCSVDGLLDPLNPAVSRLGPVWVLRDAHALARARFMKFFRMLRLVLITQSLWLLELIRGTLISINEGDLKLSYLSRPSLWSIKQVTAYRIRHTETRRKTQKDIVYAPEKIVCSLRMDERWRFNRFSPRLALLLVLCLLYQNLDFCCSLNVEGLALLRFRQRVVRDPYGALSNWNCNDRENDPCSWFGVECSDGKVVSLNLKDLCLGGILAPELGNLIHIKSIILRNNSFSGIIPKEIEELNELEVLDLGYNNFSGPLPYDLGNNLSLAILLLDNNRFLGCISPELRERTMLSELQVDENQLSNVAERASWDIGQAGDATFRRLLQNNLKAQESSPAPSPAPSNSPSSSPSPSSSPSISPSSSPSPSPSPTDPPIAPPRHSAPKPSPSANPPSQFKRTSSQSKHLWLIISGCIGASFLVVIFALICRKNKVVTVKPWATGLSGQLQKAFITGYSLEHIILHIYRF* 1078
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g01004 1077 MobiDBLite consensus disorder prediction 942 1009 - -
Eupl01g01004 1077 ProSiteProfiles GRAS family profile. 165 552 IPR005202 -
Eupl01g01004 1077 SUPERFAMILY L domain-like 764 921 - -
Eupl01g01004 1077 MobiDBLite consensus disorder prediction 969 1002 - -
Eupl01g01004 1077 Pfam Leucine rich repeat N-terminal domain 762 804 IPR013210 -
Eupl01g01004 1077 Pfam GRAS domain family 175 479 IPR005202 -
Eupl01g01004 1077 FunFam Nuclear pore complex protein NUP107 761 919 - -
Eupl01g01004 1077 Coils Coil 337 357 - -
Eupl01g01004 1077 Gene3D Ribonuclease Inhibitor 760 947 IPR032675 -
Eupl01g01004 1077 PANTHER PROTEIN MALE DISCOVERER 2 742 1064 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g01004 Eupl-Chr1 29208619 29225670 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g01004 744 915 Receptor kinase-like Gene Family AT1G66830 39.655 8.16e-24 106
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Eupl01g01004 GRAS 5.4e-39 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g01004 - - vvi:104880018 513.072