Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g01000 ATGGCAGCAGCTCTTGAATGCTGGTCGAGCAGGGCCAGCACCGACGAGGATATGGTGGAGCAGGTTTTGATGAAAACCCAGGACAGATCAGAGGGGCTTCTGGTTACTTCCTCCTCTGCTGGAGTTGGTAAGGAGTCGTCGTCTGTGATGCAGAAGAAGCTGCAGAAGCTCGGCCGTAATGTGGCTGGAGCGATTACAAATCTCAAGAACTCACTGAATCTGGATTCGGTTCGTGACCCACCTACGGCTAGGATTGAGAGTTGCCGGAAGCTTGTTTGGGGCGGCGTAGTACGCAATCTCACCCAGCTCTACCCTGGTAGTCAACTCCCGGAGAAGCTCATCTCTAACATTCGAAAGCATTTCGATTCCTTACCACTCAGCTATGCCCAGGCGGGTTTCGACATGGAAGATGTGTTTCTTCACGTTAGATTGATCGAGCAGGCAGCGGTAGATGACCACCCTGCGCTTTCGATTCAAAAGGTCTCTGAAGAGGAAACTCATGGATCTGTTTTCAAGCTCACATTTGCTTGTAATTCTTCGATTTCGTGGCCGTCTATGTCGGGGTCACTTGATAACGCTGCCATTTGCTGCAAGAAGATCCAAATCTTTGAGAAAAAGGGTTTCACGCTAGGGATTGTTCTTGTTCTGGTTCAATCCGGGCAAGAAAAATCCTTCAAGAACCGGATCGAAGCTGCCCTGGTATCTGCTCTGAAGAAGCCGAAACCCACAACAATGAAGCTCCCATTCGGGCTTTGTGGGTGTCAAGAGGAGAATACTAGGGGCCGAGAAATAGGAGAGATCAGTGATGACAATGACGTACAAAATTACGAAAATGGCATGGATTACATAAACCCTAAGATCGAGATCCAGACTCCCCTACCCATTTCGTCATTCTCCGTCTCAGTTGACGAATGGCAAACAATCCGGTCGGGTGGAGATGAGATTGGGAATTGGCTATTGAACACTGATCAAATTGAGTTTACTGATCAGATTGGACCCAATTTCTTTAAGGGGGTTTATAAGGGAAAACGAGTAGCAATTGAGAAGCTTAGAGGGTGTGATAGGGGGCATGCTTACGAGTTCGAGCTTCGAAGAGATATGTTGGAGCTTATAAGCTGTGGGCACAAAAACATTTTACAGTTCCATGGGGTTTGCATCGAAGAGAATCACGGGTTGTGTGTGGTAACGAAGATGATGGAAGGTGGATCCGTTCACGAGATTATTCAGAAGAACAAGAAGCTTCAGACTAAGGAAATTATCAAAATTGCAGCTGAAGTTGCAGAAGGGATCAAGTTCATGAACGATCATGGTCTTGCTTATAGAGACCTCAACACCCAGAGGATCTTATTGGATAGGCAGGGGAATGCTTGTATTGGGGATATGGGTATCGTCACAATTCGCAAGAACAACGGAGAGGTGATGGAGTATGAAACTGATGGTTACCGGTGGCTAGCTCCCGAGATCATTGCAGGCGATCCAGAGAGCGTTGCAGAGACATGGATGAGCAATGTATATAGTTTTGGTATGGTGGTTTGGGAGATGGTTACAGGGGAGGCAGCATATGCTGCTTACTCGCCAGTTCAGGCAGCGGTTGGGATTGCTGCCTGCGGACTGAGACCGGAGATCCCCAAGGACTGCCCACAAGTCCTAAGATCGTTGATGATGAAATGCTGGAACAGTTGCCCATCAAAGAGGCCTCAGTTCTCTGAAATCCTTACCATATTGCTGCGATCCAGCAACAACAACAACAGCAGTAGGTGA 1761 0.4787 MAAALECWSSRASTDEDMVEQVLMKTQDRSEGLLVTSSSAGVGKESSSVMQKKLQKLGRNVAGAITNLKNSLNLDSVRDPPTARIESCRKLVWGGVVRNLTQLYPGSQLPEKLISNIRKHFDSLPLSYAQAGFDMEDVFLHVRLIEQAAVDDHPALSIQKVSEEETHGSVFKLTFACNSSISWPSMSGSLDNAAICCKKIQIFEKKGFTLGIVLVLVQSGQEKSFKNRIEAALVSALKKPKPTTMKLPFGLCGCQEENTRGREIGEISDDNDVQNYENGMDYINPKIEIQTPLPISSFSVSVDEWQTIRSGGDEIGNWLLNTDQIEFTDQIGPNFFKGVYKGKRVAIEKLRGCDRGHAYEFELRRDMLELISCGHKNILQFHGVCIEENHGLCVVTKMMEGGSVHEIIQKNKKLQTKEIIKIAAEVAEGIKFMNDHGLAYRDLNTQRILLDRQGNACIGDMGIVTIRKNNGEVMEYETDGYRWLAPEIIAGDPESVAETWMSNVYSFGMVVWEMVTGEAAYAAYSPVQAAVGIAACGLRPEIPKDCPQVLRSLMMKCWNSCPSKRPQFSEILTILLRSSNNNNSSR* 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g01000 586 ProSiteProfiles Protein kinase domain profile. 325 576 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl01g01000 586 PRINTS Tyrosine kinase catalytic domain signature 432 450 IPR001245 GO:0004672|GO:0006468
Eupl01g01000 586 PRINTS Tyrosine kinase catalytic domain signature 546 568 IPR001245 GO:0004672|GO:0006468
Eupl01g01000 586 PRINTS Tyrosine kinase catalytic domain signature 502 524 IPR001245 GO:0004672|GO:0006468
Eupl01g01000 586 PRINTS Tyrosine kinase catalytic domain signature 396 409 IPR001245 GO:0004672|GO:0006468
Eupl01g01000 586 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 166 575 - -
Eupl01g01000 586 Pfam Protein tyrosine and serine/threonine kinase 343 574 IPR001245 GO:0004672|GO:0006468
Eupl01g01000 586 Gene3D Transferase(Phosphotransferase) domain 1 318 581 - -
Eupl01g01000 586 SUPERFAMILY Protein kinase-like (PK-like) 317 578 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g01000 Eupl-Chr1 29172128 29175671 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g01000 311 575 MAP Kinase Kinase Kinase AT2G17700 33.456 1.26e-48 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-7 Eupl01g01000 PK_Tyr_Ser-Thr 6.4e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g01000 - - vri:117916813 953.355