Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g00986 ATGGGGGGAAATTCGCCTTGCGCTTCCTGCAAATTGTTGCGACGACGCTGCGCCAAGGACTGCATTTTTGCCCCCTATTTCCACTCCGACGACCCGCATAAATTCGCCATTGTTCACAAGGTTTTTGGTGCTAGCAACGTTAGCAAAATGTTACAGGAGCTACCAATCCATCAGAGAGCAGATGCTGTGAGCAGCTTAGTGTATGAAGCAAATGCAAGAGTGCGTGATCCAGTTTACGGATGTGTCGGCGCCATCTCCTACCTACAAAACCAAGTCTCACAATTGCAAATGCAACTTGCAGTGGCTCAAGCAGAGATCCTTTGCATCCAGATGCAGCAAGAGCCTACCTTACCAAGTGATCACCAGATAGATCATCACCAAGATGAGAAATCACTTCTTCTTCATAGTAATCTCAATAACCTACCCCAGTATCTCAACTTTGCCTCTTCTAGCAATGTAATTCAAGACCCTCTAAAGAGAGAGTCCCTCTGGACTTGA 498 0.4659 MGGNSPCASCKLLRRRCAKDCIFAPYFHSDDPHKFAIVHKVFGASNVSKMLQELPIHQRADAVSSLVYEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQQEPTLPSDHQIDHHQDEKSLLLHSNLNNLPQYLNFASSSNVIQDPLKRESLWT* 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g00986 165 Coils Coil 85 105 - -
Eupl01g00986 165 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 4 128 - -
Eupl01g00986 165 ProSiteProfiles LOB domain profile. 5 106 IPR004883 -
Eupl01g00986 165 Pfam Lateral organ boundaries (LOB) domain 6 103 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g00986 Eupl-Chr1 28949695 28950300 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g00986 3 165 AS2 family AT2G30130 70.899 1.12e-84 245
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Eupl01g00986 LOB 7.5e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g00986 - - nnu:104602524 302.753