Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g00985 ATGGGGAGATGCAATTCTTTCTTGAGAAGTCCAAAGGAGGAACAACAAGTACCAGACACCATCGTTTCCGAATCATCGAGAATGCAAGATGTTCAGCCGACACGGAACGCCGACGATGAAATCGACATTCTGGATGAATTAGAGAGCATTTATGGAATTGAAGATGAAGAGAAGTTAGTAGGAGAGAACATGTGTGGTAATCTTGAGTGGGACTTCATAGACTGGGATGAATTTCCCATTGAAGAAGAAAGGCAACTCAAAGAAGAAGACGATTACGGCGACGAAGAAGACCATAAGTCGACCAAGAATACAAATGAAACCTTAGAAGACCATAAGGTTGCAATAAAAAGAGAGGATTTATGGTTTTGCGATGTGGAGGAGAAGACCATATCTTTGAATTTGAATTTGAATTATCAGGAGGTCATGGATGCATGGTCGGACCGAGGATCGTTTTGGGCCGACGACTGTTCTCTTTCTATGTCCAGCAACACCTTCATGGGAGAGGTGCCTGTAATGGAAGAAGAGAGAACAAGAAGAGAAGCTAGGGTACTTAGATACAAGGAGAAGCGTCAGAGTAGATTGTTCTCTAAGAAGATAAGATATCAAGTTCGTAAACTCAATGCAGAGAAAAGACCCAGACTCAAGGGTCGATTTGTGAAGAGACTTCCGGACAAAATACTTTGA 684 0.4225 MGRCNSFLRSPKEEQQVPDTIVSESSRMQDVQPTRNADDEIDILDELESIYGIEDEEKLVGENMCGNLEWDFIDWDEFPIEEERQLKEEDDYGDEEDHKSTKNTNETLEDHKVAIKREDLWFCDVEEKTISLNLNLNYQEVMDAWSDRGSFWADDCSLSMSSNTFMGEVPVMEEERTRREARVLRYKEKRQSRLFSKKIRYQVRKLNAEKRPRLKGRFVKRLPDKIL* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g00985 227 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 28 221 - -
Eupl01g00985 227 MobiDBLite consensus disorder prediction 1 39 - -
Eupl01g00985 227 Pfam CCT motif 179 221 IPR010402 GO:0005515
Eupl01g00985 227 ProSiteProfiles CCT domain profile. 179 221 IPR010402 GO:0005515
Eupl01g00985 227 MobiDBLite consensus disorder prediction 9 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g00985 Eupl-Chr1 28938680 28940967 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g00985 126 221 C2C2-CO-like Transcription Factor Family AT1G73870 45.299 1.09e-21 90.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Eupl01g00985 CCT 9.3e-18 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g00985 - - nnu:104602523 250.751