Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g00982 ATGGCCACCACCGACGCCTCTCCCAAATTCCACCAAAACCCCGACTTTCGACCAATCCCTCAACAATCTCCCGATTTTCACCCTGAGATCACCTTATCATCCCACGATGGCCTTGAATTCTGGCAATTCATGGTCGCCGGTTCCATTGCAGGCTGCGTCGAGCATACTGCGATGTTCCCCGTCGATACTCTCAAGACCCGTATGCAGGCTATTGGGTCCTGCTCAGCTCAGACCGTCAGCCTCGGACAAACCCTTCGATCGGTTTTGAAGCTCGAAGGTCCACTCGGGCTTTACCGAGGAATCGGTGCAATGGGTCTCGGTGCCGGTCCCGCACACGCGGTTTATTTTTCGGTTTATGAGATCTGTAAGGAGTTTTTTTCTGGTGGGAACCCGAATAATTCGGTAGCACATGCTGTTTCAGGAGTGTTTGCTACGGTTGCGAGTGATGCAGTGTTTACGCCAATGGACATGGTGAAGCAGAGATTGCAATTGAGTAGTAGTCCTTATAATGGGGTGTTAGATTGTGTGAAAAGGGTGTTGAGGGAAGAAGGATTTGGAGCATTTTATGCGTCTTATAGGACTACTGTTTTAATGAATGCTCCATTCACTGCTGTTCATTTTACTACATATGAAGCGGTGAAGAGAGGTTTGATGGAGGTGTCGCCGGAGAGTGCGAGCGATGAGCAGTTAATAGTTCATGCCACGGCAGGGGCAGCTGCTGGGGCTTTGGCTGCTGCAGTGACCACTCCACTTGATGTTGTGAAGACCCAATTGCAGTGCCAGGGTGTATGTGGATGTGACAGATTTTCTAACAGTTCAATTGGAGACGTTATTCGAACCATAGTGAGGAAGGACGGGTATGCGGGGCTCGTAAGGGGATGGAAGCCCAGGATGCTCTTCCATGCCCCTGCAGCTGCAATCTGCTGGTCCACGTATGAAGGCATCAAAAACCTTCTTCCAAGAACTCAATGA 972 0.5021 MATTDASPKFHQNPDFRPIPQQSPDFHPEITLSSHDGLEFWQFMVAGSIAGCVEHTAMFPVDTLKTRMQAIGSCSAQTVSLGQTLRSVLKLEGPLGLYRGIGAMGLGAGPAHAVYFSVYEICKEFFSGGNPNNSVAHAVSGVFATVASDAVFTPMDMVKQRLQLSSSPYNGVLDCVKRVLREEGFGAFYASYRTTVLMNAPFTAVHFTTYEAVKRGLMEVSPESASDEQLIVHATAGAAAGALAAAVTTPLDVVKTQLQCQGVCGCDRFSNSSIGDVIRTIVRKDGYAGLVRGWKPRMLFHAPAAAICWSTYEGIKNLLPRTQ* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g00982 323 ProSiteProfiles Solute carrier (Solcar) repeat profile. 132 216 IPR018108 -
Eupl01g00982 323 Gene3D Mitochondrial carrier domain 168 323 IPR023395 -
Eupl01g00982 323 Gene3D Mitochondrial carrier domain 22 167 IPR023395 -
Eupl01g00982 323 MobiDBLite consensus disorder prediction 1 27 - -
Eupl01g00982 323 Pfam Mitochondrial carrier protein 229 320 IPR018108 -
Eupl01g00982 323 Pfam Mitochondrial carrier protein 38 128 IPR018108 -
Eupl01g00982 323 Pfam Mitochondrial carrier protein 133 219 IPR018108 -
Eupl01g00982 323 SUPERFAMILY Mitochondrial carrier 36 313 IPR023395 -
Eupl01g00982 323 PANTHER MITOFERRIN-1-RELATED 13 319 - -
Eupl01g00982 323 PRINTS Mitochondrial carrier protein signature 43 56 IPR002067 GO:0055085
Eupl01g00982 323 PRINTS Mitochondrial carrier protein signature 189 207 IPR002067 GO:0055085
Eupl01g00982 323 PRINTS Mitochondrial carrier protein signature 56 70 IPR002067 GO:0055085
Eupl01g00982 323 PRINTS Mitochondrial carrier protein signature 147 165 IPR002067 GO:0055085
Eupl01g00982 323 PRINTS Mitochondrial carrier protein signature 237 259 IPR002067 GO:0055085
Eupl01g00982 323 FunFam Mitochondrial RNA-splicing protein MRS3 167 321 - -
Eupl01g00982 323 ProSiteProfiles Solute carrier (Solcar) repeat profile. 38 125 IPR018108 -
Eupl01g00982 323 ProSiteProfiles Solute carrier (Solcar) repeat profile. 228 318 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g00982 Eupl-Chr1 28897661 28900041 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g00982 8 319 Chloroplast and Mitochondria Gene Families AT1G07030 73.163 4.34e-163 456
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g00982 K15113 - nnu:104602520 543.502