Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g00955 ATGGCTACTACAACTGGAAGCTTGGACACCTCTTCGAATTCTTATCCAACCTTCTCTTTCTCAAACCAATTCATGAGTTCCACCTTCACTGATCTTCTCTCTGGAAATGGTAACATCGATAATCATAATCAAGAGAGAATTACAGTGAACCGAGGACTTTCCGATCGTATCGCCGATCGAACTGGAGCAGGAATTCCAAAATTCCACTCAATTCCTCCTCCTTCACTACCTCTTTCTCCTCCTTCTGCTTCTCCTTCTTCTTACTTTGCTATCTCACCTGGTCTTAGCTTAGCTGAGCTGTTGGATTCACCTGTAATTCTCTCCACTGATAATGTAAGTGCTGACTCCTGTTTCTTGTTTTCCATGAATATAGACATATTTACTTTATTTCCAACCAATATTTTCAAATTCTTCTATATGTTTTCAATCTTTATGAGTTATTTTTGCTTTTGGATTAATGGGTTTCTCTTGTTATTATGTGTATTTTATTGTGTGGGTTTGTCTACCTTGGTTTTGTATGTGCAGATTCTGCCATCTCCAACTACTGGAACATTGCCTAGTCAAACATTCAACTGGAGGGGAAATTTTGATAACTACCAGCAGGGTATCAAGCAGGAGGAGAGAAACTACTCTGATTTTTCTTTCCGACTCCAAACAAGGCCTACAACGGCCTCGTCGGGATCGATCTTTCAGTCTTCTACGGCCACGATTTCTACGGAAGAAACCTTAAAAGGACAGCAACAACCATGGAACTTTCAAGAACCCACCAAGCAAACTGATTTCTCATATGGGAAGACCACTATCAAATCCGAACTTGCTCCATTACAAAGCTTTTCTCCCGAGATTTCCAGCATACAAGCTAACACTCAAAGCAATGGTGGATTTCAGTCTGGTTATAATAACCAGTACCATCAACCTTCTCAGACTCTAAGAGAGCAGAGAAGATCAGAAGATGGATTCAACTGGAGAAAATATGGTCAGAAACAGGTTAAAGGAAGCGAAAACCCGCGTAGTTATTACAAGTGCACTTCCCCGAATTGCCCAGTGAAGAAGAAGGTAGAGAGGTCTTTGGATGGACAGATTACTGAGATAATATATAAGGGTAGCCACAATCATCCCAAGCCTCTCTCTACTAGAAGATCATCATCTTCTTCTCAACCAATTCAATCTTCCACAGCCCCCTCCTCGGAAATAACCGATCATTTCGCGACACATGGGACCACACAATCAGATTCTATTGCGACACCGGAGAATTCTTCCATCTCAATTGGGGATGATGATTTTGATCAGAGCTCTCAGAGGAGAGGAGATGAGTTTGATGAAGATGAACCTGAGGCCAAAAGATGGAAGAAAGAGAATGAAAATGAAGGTATCTCAGCTTCTGCAACAAGAACTGTGAGGGAACCTAGAGTTGTAGTTCAAACAACCAGTGATATTGATATTCTTGATGATGGATATAGATGGAGGAAATATGGACAGAAAGTAGTAAAGGGGAATCCCAACCCAAGGAGCTACTACAAGTGTACATGTGCGGGATGTCCGGTACGAAAGCACGTCGAGAGAGCATCTAATGATCTAAGGGCAGTGATCACAACATACGAAGGGAAGCACAACCATGATGTTCCCGCAGCTCGTGGTAGCGGTGGCCATGCCGTCAATAGGCCGTCACTTGATAACAACAACAACAACAACAACAATGTGCCCATGGCTATAAGGCCTACAGCGACCAATCACTCTAACCACACAACAACAGCAACAACAACAACAACAACAATGTCTCAAGCACCCTTCACACTAGAGATGTTACAGAGCTCTGGGAGTATGGGATTCTCAGGATTTGGAAACTCAATGGACTCTTACATGAGTCAACCACAGCACACAGGGACTGCATTCCATAGAGCCAAAGAAGAAGTAAGGGACGACTTGTTTCTCGAGTCGCTGCTATATTAA 1950 0.4262 MATTTGSLDTSSNSYPTFSFSNQFMSSTFTDLLSGNGNIDNHNQERITVNRGLSDRIADRTGAGIPKFHSIPPPSLPLSPPSASPSSYFAISPGLSLAELLDSPVILSTDNVSADSCFLFSMNIDIFTLFPTNIFKFFYMFSIFMSYFCFWINGFLLLLCVFYCVGLSTLVLYVQILPSPTTGTLPSQTFNWRGNFDNYQQGIKQEERNYSDFSFRLQTRPTTASSGSIFQSSTATISTEETLKGQQQPWNFQEPTKQTDFSYGKTTIKSELAPLQSFSPEISSIQANTQSNGGFQSGYNNQYHQPSQTLREQRRSEDGFNWRKYGQKQVKGSENPRSYYKCTSPNCPVKKKVERSLDGQITEIIYKGSHNHPKPLSTRRSSSSSQPIQSSTAPSSEITDHFATHGTTQSDSIATPENSSISIGDDDFDQSSQRRGDEFDEDEPEAKRWKKENENEGISASATRTVREPRVVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTCAGCPVRKHVERASNDLRAVITTYEGKHNHDVPAARGSGGHAVNRPSLDNNNNNNNNVPMAIRPTATNHSNHTTTATTTTTTMSQAPFTLEMLQSSGSMGFSGFGNSMDSYMSQPQHTGTAFHRAKEEVRDDLFLESLLY* 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g00955 649 Gene3D WRKY domain 469 535 IPR036576 GO:0003700|GO:0006355|GO:0043565
Eupl01g00955 649 SMART WRKY_cls 316 374 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl01g00955 649 SMART WRKY_cls 482 541 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl01g00955 649 ProSiteProfiles WRKY domain profile. 477 542 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl01g00955 649 MobiDBLite consensus disorder prediction 428 457 - -
Eupl01g00955 649 Gene3D WRKY domain 302 376 IPR036576 GO:0003700|GO:0006355|GO:0043565
Eupl01g00955 649 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 249 572 IPR044810 GO:0003700
Eupl01g00955 649 MobiDBLite consensus disorder prediction 287 309 - -
Eupl01g00955 649 Pfam WRKY DNA -binding domain 317 373 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl01g00955 649 Pfam WRKY DNA -binding domain 483 539 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl01g00955 649 MobiDBLite consensus disorder prediction 365 463 - -
Eupl01g00955 649 MobiDBLite consensus disorder prediction 375 427 - -
Eupl01g00955 649 ProSiteProfiles WRKY domain profile. 311 375 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl01g00955 649 MobiDBLite consensus disorder prediction 310 324 - -
Eupl01g00955 649 FunFam WRKY transcription factor 304 376 - -
Eupl01g00955 649 MobiDBLite consensus disorder prediction 287 345 - -
Eupl01g00955 649 SUPERFAMILY WRKY DNA-binding domain 474 542 IPR036576 GO:0003700|GO:0006355|GO:0043565
Eupl01g00955 649 MobiDBLite consensus disorder prediction 538 562 - -
Eupl01g00955 649 SUPERFAMILY WRKY DNA-binding domain 311 375 IPR036576 GO:0003700|GO:0006355|GO:0043565
Eupl01g00955 649 FunFam WRKY transcription factor 33 469 535 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g00955 Eupl-Chr1 28504584 28507091 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g00955 311 648 WRKY Transcription Factor Family AT2G38470 55.556 4.61e-117 358
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Eupl01g00955 WRKY 1.3e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g00955 K13424 - vvi:100243352 653.284