Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g00938 ATGGTTTCTAGGGAGCAAAAGAGAGCAGCTCTGTACGAGAAGCTGCAACTGCTTCGTTCCGTCACTAACTCTCATGCATTAAATAAAACCTCAATTATAGTAGATGCATCCAAGTATATAGAAGAGTTGAAGCAAAAAGTAGAAGGATTGAATCAAGTTATTGCCACTGCACAAAACTCCTCTAACCAAGCTCCATTGCCTGTGCAGGTCACAGTTGAAACCCAAGAAAAGGGTTTTCTAATCAATGTGTTTTCAGAAAGAACTGGCCCGGGTTTGCTTGTCTCCATATTGGAAGCCTTTGAGGACTTGGGTCTTAATGTACTCGACGCTAGGGTTTCTTGTACAGACAGATTTTGTCTAGAAGCTGTTGGAGGAGAAAATGAAGGACAAGTTGAAAGCATAGATGCTCAAGTTGTGAAACAAGCAGTGTTGCAAGCTATCAAGAATTGGAGTGAAAGTAGTGAGCAGGACTAG 474 0.4177 MVSREQKRAALYEKLQLLRSVTNSHALNKTSIIVDASKYIEELKQKVEGLNQVIATAQNSSNQAPLPVQVTVETQEKGFLINVFSERTGPGLLVSILEAFEDLGLNVLDARVSCTDRFCLEAVGGENEGQVESIDAQVVKQAVLQAIKNWSESSEQD* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g00938 157 CDD ACT_UUR-ACR-like 90 147 - -
Eupl01g00938 157 Coils Coil 33 60 - -
Eupl01g00938 157 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 1 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g00938 Eupl-Chr1 28139063 28140551 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g00938 11 145 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 28.276 3.52e-08 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g00938 - - tss:122656142 258.455