Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g00933 ATGGCGGACTCTTCAGATCGCAAATACCGTCAATACCACCCTTACCAAGACCTCCATGTCCCGATCCACAACCTCTACAACCTCCCCACCTCACCCGAATACCTCTTCCAGGAAGAAGCTGCCGTCCAACGCCGCTCGTGGGGTGAGAATTTACAGTTTTATACCGGTTCTGGGTACCTCAGCGGCGCCATCTTCGGGGCCGCTAAGGGGTCAGTTGAAGGTCTCAAAGCTGCGGAACCAGGCGATACCTTGAAGCTACGTATTAATCGGGTCTTGAATTCTGGTGGGCAGACTGGAAGAAAGTATGGGAATTCTTTGGGCGTTGTGGGTTTGATCTTCGCTGGATTGGAGAGCGGGATTATACACTTGAGGGGGACGGATGATTTGTTGAACAGCGTTTTAGCTGGGTTGGGCACCGGAGCGCTCTACAAGGCAGCATCTGGGCCACGGTCTGCGGCTGTTGCTGGCGCCATCGGAGGGTTGGCTGCGGGTGTTGCTGTCGCAGGCAAGCAGGCAATCAAAAGATATGTTCCTATATAG 540 0.5407 MADSSDRKYRQYHPYQDLHVPIHNLYNLPTSPEYLFQEEAAVQRRSWGENLQFYTGSGYLSGAIFGAAKGSVEGLKAAEPGDTLKLRINRVLNSGGQTGRKYGNSLGVVGLIFAGLESGIIHLRGTDDLLNSVLAGLGTGALYKAASGPRSAAVAGAIGGLAAGVAVAGKQAIKRYVPI* 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g00933 179 Pfam Tim17/Tim22/Tim23/Pmp24 family 54 162 - -
Eupl01g00933 179 PANTHER TIM23 21 167 IPR045238 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g00933 Eupl-Chr1 28101902 28103854 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g00933 5 175 Chloroplast and Mitochondria Gene Families AT1G17530 61.850 4.59e-66 198
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g00933 K17794 - ming:122081073 295.434