Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g00928 ATGTCCAGAGAAAGGGAGAGATTTGATGAGGTAGGCAAGAAGATTAAGAGAGAATCCGATGCTTCTGATCAAATGGGAAGGAGACATTTGTTAGGCCCTCCAGGGACCTTAAACACCATTACACCTTGTGCTGCGTGTAAGCTTCTGCGGCGACGGTGTGCGCAAGAATGCCCTTTCTCTCCATATTTCTCTCCTCATGAACCCCAGAAGTTCGCTTCTGTTCACAAAGTTTTCGGTGCAAGTAACGTCTCGAAGATGCTAATGGAGGTGCCGGAGAACCAAAGAGCCGATGCGGCGAACAGTCTTGTTTACGAGGCGAATGTAAGGCTCAGGGACCCAGTATATGGGTGTATGGGTGCAATCTCAGCCTTGCAACAACAAGTTCAATCCTTACAAGCCGAGCTTAATGCAGTAAGAGCTGAGATACTGAAGTACAAGTACAGGGAAACTAGTACTAATATCATTTCTTCATCTCATGCTACTTTGCTTTCTCCTAATGCAGTGTCGGTGGCTGCACCGCCACCGGTTCCTCCTCCTCTTCCTTCCTCTTCTTCTTCCATGTACACGCCGCCTTCGAGCACCACTGATTATAGCTCTATTTCGAATGATAATGTCTCTTATTTTGGCTAA 630 0.4698 MSRERERFDEVGKKIKRESDASDQMGRRHLLGPPGTLNTITPCAACKLLRRRCAQECPFSPYFSPHEPQKFASVHKVFGASNVSKMLMEVPENQRADAANSLVYEANVRLRDPVYGCMGAISALQQQVQSLQAELNAVRAEILKYKYRETSTNIISSSHATLLSPNAVSVAAPPPVPPPLPSSSSSMYTPPSSTTDYSSISNDNVSYFG* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g00928 209 ProSiteProfiles LOB domain profile. 41 142 IPR004883 -
Eupl01g00928 209 MobiDBLite consensus disorder prediction 1 33 - -
Eupl01g00928 209 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 38 188 - -
Eupl01g00928 209 MobiDBLite consensus disorder prediction 173 209 - -
Eupl01g00928 209 Pfam Lateral organ boundaries (LOB) domain 42 139 IPR004883 -
Eupl01g00928 209 MobiDBLite consensus disorder prediction 1 25 - -
Eupl01g00928 209 Coils Coil 121 148 - -
Eupl01g00928 209 MobiDBLite consensus disorder prediction 186 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g00928 Eupl-Chr1 28021462 28023607 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g00928 1 152 AS2 family AT2G30340 67.901 1.17e-75 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Eupl01g00928 LOB 3.9e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g00928 - - msin:131253554 320.087