Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g00924 ATGGAGAATAAAACAAGTGTGTTGATGCAAAAGTATGAATTAGGGAGATTATTAGGGCAAGGCACCTTCGCTAAGGTCTACTATGCAAGGGACCTTAAGTCTGGCCAGAGTGTGGCCATTAAGGTTATTGACAAAGAGAAGGTCCTGAAGGTTGGGCTGATTGATCAGATCAAGCGAGAGATTTCTGTAATGAAGCTGGTTAGACATCCAAATATTGTGCAGCTTTACGAGGTCATGGCTAGCAAAACCAAGATTTACTTTGTCATGGAATATGTTAAAGGCGGTGAGCTCTTTAACAAGGTAGCCAAGGGCAAGCTCAAGGAGGACGTTGCACGGAAATATTTTCAACAGCTGATCTGCGCTGTTGATTTTTGCCACAGCAGAGGTGTTTATCACCGGGATTTGAAACCCGAAAACCTACTTTTAGATGAGAATGGGAATCTAAAGGTTTCAGACTTTGGGTTGTCTGCCCTTGCTGAATCTAAGCACCAAGATGGGTTACTCCACACAACTTGTGGGACCCCTGCTTATGTTGCTCCTGAAGTGATCAATAGAAAAGGGTATGATGGAGCTAAAGCTGACATTTGGTCTTGTGGGGTGATCTTATTTGTTCTACTGGCAGGTTATCTTCCATTCCACGATTCGAATCTCATGGAAATGTATAGGAAGATTGGTAAAGGAGAGTTCAAATGCCCTAATTGGTTCCCATCAGAAGTACGCAAGCTTCTGTTAAAGATCTTGGATCCGAACCCCAATACTAGGATTTCAATTGCAAATATCATGGAAAATTCTTGGTTCAGAAAGGGGTTCAATTCCAAATCAATAAAAACTGAAACAGAAAGTAAGGAACTGACTCCTTTGGATGCTGATGCGGTTTTCAATTCTTTTGAGAATCGCAGCACTGCTGCTGAAGCAAAGCAAGAGTTGAAAAAACCAACTAACTTGAATGCTTTTGATATCATCTCGCTCTCTGCGGGGTTCGATCTCTCTGGCTTGTTCGAGGAAAATGACAACAAGAGGGAAGCACGATTCACATCCAGGCAGCCTGCGTCAGCCATCATCTCTAAGCTGGAGGACATTGCGAAGCGTCTGAGGCTGAAAGTGAAGAAGAAGGATGAAGGGTTGTTGAAATTGGAGGGATCAAAGGAAGGGAGGAAGGGGGTGTTGTCCATTGATGCAGAGATCTTTGAAGTCACTCCGTCTTTTCACTTGGTTGAGGTGAAGAAGTCCAGCGGTGATACCTTAGAGTATCAGAAGATATTGAAACAAGACATAAGGCCTGCTCTCAAGGACATTGTTTGGGCTTGGCAAGGTGATCAGCAGCAGCAACAACAACAGTTGCAGCCTTCTTGA 1353 0.4368 MENKTSVLMQKYELGRLLGQGTFAKVYYARDLKSGQSVAIKVIDKEKVLKVGLIDQIKREISVMKLVRHPNIVQLYEVMASKTKIYFVMEYVKGGELFNKVAKGKLKEDVARKYFQQLICAVDFCHSRGVYHRDLKPENLLLDENGNLKVSDFGLSALAESKHQDGLLHTTCGTPAYVAPEVINRKGYDGAKADIWSCGVILFVLLAGYLPFHDSNLMEMYRKIGKGEFKCPNWFPSEVRKLLLKILDPNPNTRISIANIMENSWFRKGFNSKSIKTETESKELTPLDADAVFNSFENRSTAAEAKQELKKPTNLNAFDIISLSAGFDLSGLFEENDNKREARFTSRQPASAIISKLEDIAKRLRLKVKKKDEGLLKLEGSKEGRKGVLSIDAEIFEVTPSFHLVEVKKSSGDTLEYQKILKQDIRPALKDIVWAWQGDQQQQQQQLQPS* 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g00924 450 Gene3D Transferase(Phosphotransferase) domain 1 92 295 - -
Eupl01g00924 450 ProSiteProfiles Protein kinase domain profile. 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl01g00924 450 CDD STKc_SnRK3 11 265 - -
Eupl01g00924 450 ProSiteProfiles NAF domain profile. 310 334 IPR018451 GO:0007165
Eupl01g00924 450 FunFam Non-specific serine/threonine protein kinase 310 434 - -
Eupl01g00924 450 FunFam Non-specific serine/threonine protein kinase 3 91 - -
Eupl01g00924 450 Pfam NAF domain 312 370 IPR004041 GO:0007165
Eupl01g00924 450 Gene3D Phosphorylase Kinase; domain 1 2 91 - -
Eupl01g00924 450 FunFam Non-specific serine/threonine protein kinase 2 289 - -
Eupl01g00924 450 Pfam Protein kinase domain 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl01g00924 450 ProSitePatterns Protein kinases ATP-binding region signature. 18 41 IPR017441 GO:0005524
Eupl01g00924 450 CDD CIPK_C 316 430 - -
Eupl01g00924 450 Gene3D Kinase associated domain 1, KA1 310 435 - -
Eupl01g00924 450 SMART serkin_6 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl01g00924 450 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 5 430 - -
Eupl01g00924 450 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Eupl01g00924 450 SUPERFAMILY Protein kinase-like (PK-like) 8 283 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g00924 Eupl-Chr1 27956331 27960137 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g00924 1 442 CBL-interacting serine-threonine protein kinases AT5G58380 70.330 0.0 666
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Eupl01g00924 Pkinase 3.4e-76 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g00924 K07198 - nnu:104594533 748.043